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Information for unigene UN57516

FASTA Sequence
Unigene ID: UN57516Length: 637 SSR 
TCCTTAATATGAAGGTCAAATCTGGTCATGATAGCTTAATATAAGAAGCATATAAGATTGAAGAAGAATGCCAAAAGTTCATTACA
TGAATTCACAAATCGATAACAGACAACAAAGAGTAATAACAGAGATCATTTCTCTTTCTCTCTCTCTCTCTCTCTCTTAGCCTCTC
TTGACAGGATCAAAGTTGGAGACACCAACAACAACACCGATGATGACCGTGAGCACCACGCCGGATTTACGGGTTGGACCTTTCCG
GTTAGTCCATAAGGGTCGGATACCCATATTCCAGGACCATATAATCCTGTTACATGAAATGCGCCAAAACCAAAGCAAGCCACTCC
TGAAAGAAATAAATGAATTCCAAAAATCTTGGGCAAATCCAAAGAAGGTTTTCCTGTACGTTCATCACAAAAAATTTCTAGATCCC
AATATACCCAATGCCAAATAGCTGCCAAGAAGCACAAGCCAGAAAACACGATATGTGCTCCGGCTACCCCTTCGTAACTCCAAAGA
CCCGGATTCGTTATAGTCCCTCCTGTAATATTCCAACCGCCCCATGAATTGGTTATTCCTAAACGAGTCATGAAAGGTATAACGAA
CATACCTTGTCTCCACATTGGATCAAGAACAGGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_051084 photosystem II 47 kDa protein [Arabidopsis thaliana]7804e-081
AAG12343 photosystem II CP47 protein [Arabidopsis thaliana]7804e-081
YP_001123312 PSII 47KDa protein [Barbarea verna]7804e-081
YP_001123056 PSII 47KDa protein [Aethionema grandiflorum]7804e-081
YP_001122972 PSII 47KDa protein [Aethionema cordifolium]7804e-081

Swiss-Prot top hits (Blast detail)Scoree value
A4QJE1 Photosystem II CP47 chlorophyll apoprotein7802e-082
A4QJM5 Photosystem II CP47 chlorophyll apoprotein7802e-082
A4QK44 Photosystem II CP47 chlorophyll apoprotein7802e-082
P56777 Photosystem II CP47 chlorophyll apoprotein7802e-082
A4QKD1 Photosystem II CP47 chlorophyll apoprotein7802e-082

TrEMBL top hits (Blast detail)Scoree value
Q8HS55 Photosystem II CP47 chlorophyll apoprotein (Fragment)7803e-081
A9XV39 Photosystem II CP47 chlorophyll apoprotein7784e-081
A9XV95 Photosystem II CP47 chlorophyll apoprotein (Fragment)7751e-080
A9XV99 Photosystem II CP47 chlorophyll apoprotein (Fragment)7751e-080
A9XVW6 Photosystem II CP47 chlorophyll apoprotein (Fragment)7751e-080

Arabidopsis top hits (Blast detail)Scoree value
ATCG00680.1 encodes for CP47, subunit of the photosystem II reaction center.7802e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members