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Information for unigene UN57643
| FASTA Sequence |
| Unigene ID: UN57643 | Length: 683 |
SSR | | AAAATTACAAGCTGTTGGAAGTGAGAGAGAGAGAGACATTAGAGAAGTGGATACAAACTGAAACAAATAAATAAAATAGCAATAGT
GATCATCCCAACAAAACAAGGCTAAAACGCACATATTTTATCTAGCATATGTTCCAATACAGAGAATCTCCTTATCATTGTGATGG
TGAGGAGATTGTGCATCATCATAACTACTTCTTTTTAAGCCCTGATCTCTCGGCCAAATATCCAGCTGAAAGGTATGTCTCTTGCA
GCGTCTTTGCTTCTCCCTTGAGCCCTCTCTTCGAGTTTGCGGATCCTAGCTGGCAATTTACAGAGATAGTCCTGGGCCTTGTGTCC
ATCACCAGAGAGACCTGCCAAGTTCTCCACGTTCCACCGCCTGACAAGAAACTCCAGTATATCAGCATAGTCCCTAGCAGTGTAGA
CACCAAGCCTCTGCGCCACGGAGGAGAAGTGCTCAAACAGATTGTCATCAGAGCCATCGTACATCAAATGAGCAGGCATAGCTATC
TTTTTCCTCATCATGTCAGCAAAGCCTACGACAGTGGTGTCAGGATCGATCTCGAAAAGCTTCTCTACGATCTTGGTGTAAGCAGT
CTCGTGACGCTTCTCATCAGCAGCGATGGTGCCGCAGATCTGCGCTAGCTTCGAGTCCCCAAGCTTCTTTGCGAGTCCAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871710 hypothetical protein ARALYDRAFT_909604 [Arabidopsis lyrata subsp. lyrata] | 710 | 6e-073 |
| XP_002882244 hypothetical protein ARALYDRAFT_477504 [Arabidopsis lyrata subsp. lyrata] | 693 | 5e-071 |
| AAM65642 stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 686 | 3e-070 |
| NP_197128 acyl-[acyl-carrier-protein] desaturase [Arabidopsis thaliana] | 686 | 3e-070 |
| AAM64846 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 685 | 4e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 641 | 3e-066 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 639 | 5e-066 |
| Q43593 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 635 | 1e-065 |
| P22243 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 633 | 2e-065 |
| Q41319 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 629 | 7e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LA10 Stearoyl-acyl carrier protein desaturase | 686 | 2e-070 |
| Q9LF04 AT5g16240/T21H19_160 | 686 | 2e-070 |
| Q8L468 Putative stearoyl-acyl carrier protein desaturase | 685 | 3e-070 |
| Q8LBC6 Putative stearoyl-acyl carrier protein desaturase | 685 | 3e-070 |
| Q9M879 Putative stearoyl-acyl carrier protein desaturase | 685 | 3e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 687 | 1e-072 |
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 686 | 2e-072 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 610 | 1e-063 |
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 610 | 1e-063 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 563 | 3e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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