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Information for unigene UN57656

FASTA Sequence
Unigene ID: UN57656Length: 611 SSR 
GCAAACAAAAAAGGAGGATGGAAAAAAAACAAAAACTTAATAGTCAATCTTGGGAAACAAACAGAGGTGGACGGACTAGTTGAGTT
GCACTAAGCTAGGAACATAATAGAAAGCACGTGAATAACAAAATGGGTATGCAGATTCTTTAACAACTTGTTGTTTCAAGGAGGAT
GATCCATCATCATCCACTCCTCCTCCTCCTCCAACAAAGATGTAAGCTATATCACGAGTGGCGCGACCATTACGGGTGTTTTTATC
AAAAACCACCGCGACTTTCTTCTCCTGGTCAATGAAGAAACACACAGATTCCCGAAGAAACTGCCAATGGGGGTGAATGAGCTGTT
TGATATTCGCCGATAAGAAAACCTTGCTGTTCCAGGACAGACCTGCGTTGGGCTGCTCCTCAATCGTATTGGAGATCCATATCTCC
ATCTCCAATGTTTCACACTGGAACAAAACCACAAGACTAGTAGATGATGATGATAGAATCAAAGTTTCGTTAGCGAAAGCCTCAAA
GGGGAGAGGCAAAGGCGGGGAGAATGTCTCTGTTGTGAAATCAAAACAGACTAAGAAACAAATGGCATCAAAATTCATAGCTTCTG
CTGCACACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB02472 unnamed protein product [Arabidopsis thaliana]3037e-026
NP_566636 F-box protein [Arabidopsis thaliana]3037e-026
XP_002885228 F-box family protein [Arabidopsis lyrata subsp. lyrata]2983e-025
XP_002862341 hypothetical protein ARALYDRAFT_333377 [Arabidopsis lyrata subsp. lyrata]2875e-024
XP_002883534 hypothetical protein ARALYDRAFT_899044 [Arabidopsis lyrata subsp. lyrata]2822e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q8LCE9 F-box protein At3g194703033e-027
Q9FIH1 F-box protein At5g424602532e-021
Q9LV45 Putative F-box protein At3g245802505e-021
Q9LUQ9 F-box/kelch-repeat protein At3g167402471e-020
Q84X17 F-box protein At2g178302228e-018

TrEMBL top hits (Blast detail)Scoree value
Q9LUI4 Gb|AAD03575.12651e-021
Q84V15 At2g187802363e-018
Q9ZV41 Expressed protein2363e-018
Q058M6 At2g178302221e-016
Q9LHQ2 Gb|AAD03575.11952e-013

Arabidopsis top hits (Blast detail)Scoree value
AT3G19470.1 F-box family protein3033e-028
AT3G19470.2 F-box family protein3033e-028
AT5G42460.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G17830.1); Has 799 Blast hits to 768 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).2577e-023
AT3G16740.1 F-box family protein2471e-021
AT2G18780.1 F-box family protein2362e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members