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Information for unigene UN57789
FASTA Sequence |
Unigene ID: UN57789 | Length: 626 |
SSR | | ACAAAATCTACAATCAATTGTTTCGAAAATGAAGCTGCTTCATGCATCACTGTGTTTGATCAGTTTTCTCCTGATCTTGCCTTCGA
TCCTCGCTGCTTCTTCCTCTAAAGATTTCGATTTCTTCTACTTCGTCTAACAATGGCCAGGATCATACTGTGACACAGAGAAGAGT
TGTTGCTTTCCAACTTCGGGCAAACCAGCTGCTGATTTTGGAATCCACGGTCTTTGGCCTAATTACGAAGATGGAACTTATCCTTC
TAACTGTGACGACACTAAACCATTTGGATATCAAGGCTCTAGAAGATGGTTTTGTTTCTGTGACTCCACTATCTCTACTTCCAAAC
ATAGATTCAGAAACTCAAGCCGCGGCATCAGAATGGATTTGCAAATACCTTAACGCTCATCAATGAAAAAGGGTGATGTGGCCAAA
ACTCTGCCTACACATCTGGTAACTGGATTCTCTGCATTTGTTTGTTCGTGTGGTCATGTTGTCATTTTAATCCTTTTAGTTTATTT
GTTTATTTGATCCCCGCCTAGAAGTCTCGTGGAGTTTTTTTTTGGCTCGTTTGTTTGTTTGTTTGTTTTGTCAGTAGCTGTTTGGG
AACGCTTACTTTTGTATTGGCAAA
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GenBank top hits (Blast detail) | Score | e value |
AAM63798 ribonuclease, RNS1 [Arabidopsis thaliana] | 400 | 4e-037 |
XP_002875183 ribonuclease, RNS1 [Arabidopsis lyrata subsp. lyrata] | 399 | 5e-037 |
NP_178399 ribonuclease 1 [Arabidopsis thaliana] | 392 | 3e-036 |
ABK28493 unknown [Arabidopsis thaliana] | 392 | 3e-036 |
CAA10130 ribonuclease T2 [Cicer arietinum] | 336 | 1e-029 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P42813 Ribonuclease 1 | 392 | 2e-037 |
P80022 Extracellular ribonuclease LE | 313 | 2e-028 |
P42815 Ribonuclease 3 | 273 | 1e-023 |
P80196 Intracellular ribonuclease LX | 272 | 1e-023 |
P42814 Ribonuclease 2 | 150 | 2e-009 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9ZQX1 Ribonuclease T2 | 336 | 7e-030 |
B9S8X3 Ribonuclease t2, putative | 322 | 3e-028 |
Q9LLS1 RNase PD2 (Fragment) | 321 | 4e-028 |
B9HI71 Predicted protein | 317 | 1e-027 |
B9HY02 Predicted protein | 313 | 3e-027 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G02990.1 RNS1 (RIBONUCLEASE 1); endoribonuclease/ ribonuclease | 392 | 2e-038 |
AT1G14220.1 ribonuclease T2 family protein | 292 | 7e-027 |
AT1G26820.1 RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease/ ribonuclease T2 | 273 | 1e-024 |
AT1G14210.1 ribonuclease T2 family protein | 227 | 2e-019 |
AT1G72880.2 acid phosphatase survival protein SurE, putative | 170 | 9e-013 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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Unigene Members | |
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