Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN57905

FASTA Sequence
Unigene ID: UN57905Length: 717 SSR 
CAAGCCGCAAAGCCTCTTAAGACAGACGCTTCTTCACCCTTGCAGATTTCGCTAACCGATTCTTAAGATGTTCTCCGCTCAGAACA
AGATCAAGAAGGACAAGAATGCCGAGCCGACAGAATGCGATGTGCAAGTTGCTCAGGCTTTGTTTGATTTAGAAAACACCAACCAG
GAGTTGAAAAGCGAGTTGAAAGATCTTTACATCAACCAAGCTGTTAACATGGACATCTCTGGAAACCGCAAGGCTATTGTGATTTA
CGTCCCGTTCAGATTGAGGAAAGCTTTCCGCAAGATCCACCCCCGTCTCGTTAGAGAGCTTGAGAAGAAGTTCAGTGGAAAGGATG
TTATCTTTGTTGCCACAAGAAGGATCATGCGTCCACCAAAGAAGGGTGCTGCTGTTCAGAGGCCACGCAACAGGACTCTAACCTCT
GTTCATGAAGCTATGCTCGAGGATGTCGCTTCCTGCTGAGATCGTTGGAAAACGTACTCGTTACCGTCTCGATGGTTCCAAAGTCA
TGAAGGTGTTTTTGGAGGCCAAGGAAAGGAACAACACAGAGTACAAGCTCGAGACTATGGTGGGAGTCTACCGCAAACTTACTGGA
AAGGATGTTACTTTTGAGTACCCGGTTGAAGCTTGATGATGGATGATGCTCTGGAGAATCATCATCATCATCATCATCATCATGAT
AGAGAAGAGAGGTTTTGAATTTATATGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197117 40S ribosomal protein S7-3 [Arabidopsis thaliana]6391e-064
XP_002871704 40S ribosomal protein S7 [Arabidopsis lyrata subsp. lyrata]6381e-064
AAM64364 40S ribosomal protein S7-like [Arabidopsis thaliana]6344e-064
XP_002882238 40S ribosomal protein S7 [Arabidopsis lyrata subsp. lyrata]5861e-058
NP_186905 40S ribosomal protein S7-2 [Arabidopsis thaliana]5852e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q8LD03 40S ribosomal protein S7-36395e-066
Q9M885 40S ribosomal protein S7-25859e-060
Q9XH45 40S ribosomal protein S75803e-059
Q9C514 40S ribosomal protein S7-15203e-052
Q9ZNS1 40S ribosomal protein S75203e-052

TrEMBL top hits (Blast detail)Scoree value
Q1KUR6 Putative uncharacterized protein5814e-058
Q1KUM0 Putative uncharacterized protein5601e-055
C6T2H2 Putative uncharacterized protein5431e-053
B9HBT7 Predicted protein (Fragment)5331e-052
B7FMQ4 Putative uncharacterized protein5303e-052

Arabidopsis top hits (Blast detail)Scoree value
AT5G16130.1 40S ribosomal protein S7 (RPS7C)6395e-067
AT3G02560.1 40S ribosomal protein S7 (RPS7B)5859e-061
AT3G02560.2 40S ribosomal protein S7 (RPS7B)5859e-061
AT1G48830.1 40S ribosomal protein S7 (RPS7A)5203e-053
AT1G48830.2 40S ribosomal protein S7 (RPS7A)5203e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members