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Information for unigene UN57944
| FASTA Sequence |
| Unigene ID: UN57944 | Length: 718 |
SSR | | GGAAGAAGAAGAAGAAGAAGAAGAATACTAATGGTGAAATGGTGGAGTCAGACCAGAAATCAGTTGCAAAAGAACCCAAGACGCTA
TTTGTTGGACATCTTCCCTTTCAGTTTGAGAAATCTGACTTAAAGAATTTCTTCAAAGAAGTTGGTGAAATCGTCGATGTTAGACT
TGCTAAGGGATTCGCACATGTAGAGTTTGCTTCTGAAGAAGCTGCTCACAAGGCATTGGAACTGAATGGTAAACCATTACTAGGCC
GCAATATTCTGCTTGATTTTGCTAAGGCGAGACCTACTCCACGTCCAGGAAACAAAGTTAAAACGATCTTTGTTACAGGATTCAAC
AAGTCTGTGAGTGAAGATGATATGAAAACTTCCTTGAGAAATCATTTTGGTGCTTGTGGAGAGATCAAAAGGATTTCTCTTCCTTA
TTACCAAGAGACTGGTGATAGCAAGGGGGTGGCTTACCTTGATTTAAGTGAGGATGGGTTCATCAAGGCACTGGAACTAAACGGAA
GTTCCCTAGGAGGACGGAACATTGTGGTGATTGAAGCTAGACCAAAAGAAAAGAATGCTGATGGGAATAGTGGACGTGGCAATGAT
GACACCTCTAAGAGAGGACCTGAACATGGCGACCGTGACAGCCTCAAAAGAGGACCTGGAAGAGGCAATGGTGACCGTACAACACC
CAGCAAAGATAGCGTTATTGCCTCAGCAGC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002277195 PREDICTED: hypothetical protein [Vitis vinifera] | 466 | 1e-044 |
| BAB02219 unnamed protein product [Arabidopsis thaliana] | 465 | 2e-044 |
| NP_188491 nucleolin [Arabidopsis thaliana] | 465 | 2e-044 |
| XP_002885266 hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp. lyrata] | 445 | 3e-042 |
| BAJ99185 predicted protein [Hordeum vulgare subsp. vulgare] | 426 | 5e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P15771 Nucleolin | 163 | 8e-011 |
| P40561 RNA-binding protein SGN1 | 128 | 9e-007 |
| Q62504 Msx2-interacting protein | 121 | 6e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q1PEP5 Nucleolin | 465 | 1e-044 |
| Q9LIH8 Similarity to nucleolin | 465 | 1e-044 |
| B9HGM3 Predicted protein | 452 | 4e-043 |
| A9PEY6 Putative uncharacterized protein | 449 | 8e-043 |
| B9H5S7 Predicted protein | 440 | 9e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G18610.1 ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding | 491 | 7e-050 |
| AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding | 265 | 1e-023 |
| AT5G03480.1 nucleic acid binding / nucleotide binding | 168 | 2e-012 |
| AT1G72800.1 nuM1-related | 159 | 2e-011 |
| AT1G45100.1 polyadenylate-binding protein, putative / PABP, putative | 145 | 9e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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