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Information for unigene UN57963

FASTA Sequence
Unigene ID: UN57963Length: 697 SSR 
CCCCCCGCAGGGTAGGATGATGCAAGGAACGCAGGGAATGATGGGGACGATTGGGTCAGGCTCTCAAATGCGGCCAAGTGGAATAA
TGCCTCAGCATCAGCAGAGACCGGGTCAAGCCTCTCTGAGACCAGCTTCTTTCCGAGTAGTCCATCTCCTGTTCCTCAAAACTTTC
AAGCGCATGGCCTAATGAGACCTTCATCTATTGGTTCTCCTGGTGTCCAATCTACTGGTGCAGCACAGCACAGCTTGCAAGCCACT
AATCAACCATGGTTATCATCTTCTGCCCAAGGGAAGCCGCCTTTGGCACCCCCTTCTTATAGACCGCAAGTAAATAATAATCCCTC
CTCCATGCAACAAAGATCTCATGTTACCCAGCAACATCTTTCCACGTCACCAGCGACTTCACAGCCTCAGCAACAGCAACAACAAC
AACAACAACAACATCAGCTTCAGCCTCAAGAACAACATCAACAATTGAGACCTCCGCATCAGAATTTACCTTACTCACATCAACCG
GCCCGGGTCCAAGGGTTGGTAAATCAGAAAGCTGCTTCTCCAGCAATGCCGACCCCGCCCCCTGTGCCTCAACCAGGAAGCCAAGC
TAAGCCAGTTTCAGTAGAGAATGAGAGTCTGATGATCGTATCCTGGGGAAAGAAGCATCCATGAGCTACTTCAACAGATTGATCCG
TCAGAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884775 tata-associated factor II 58 [Arabidopsis lyrata subsp. lyrata]5914e-059
NP_566367 transcription initiation factor TFIID subunit D10 [Arabidopsis thaliana]5629e-056
XP_002528715 protein with unknown function [Ricinus communis]2877e-024
EGD76873 hypothetical protein PTSG_12694 [Salpingoeca sp. ATCC 50818]1622e-009
EGO57822 hypothetical protein NEUTE1DRAFT_146340 [Neurospora tetrasperma FGSC 2508]1604e-009

Swiss-Prot top hits (Blast detail)Scoree value
Q54DK4 Alpha-protein kinase 11701e-011
Q9JKB0 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 11592e-010
Q54VC4 Activating signal cointegrator 1 complex subunit 21512e-009
Q556J6 Putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G02740071432e-008
Q75BI6 Mediator of RNA polymerase II transcription subunit 151413e-008

TrEMBL top hits (Blast detail)Scoree value
Q9SR71 Putative TBP-associated 58 kDa subunit protein5626e-056
B9SRU6 Putative uncharacterized protein2875e-024
A9V2M8 Predicted protein1513e-008
Q553B4 Putative uncharacterized protein1451e-007
B4JK19 GH172411432e-007

Arabidopsis top hits (Blast detail)Scoree value
AT3G10070.1 TAF12 (TBP-ASSOCIATED FACTOR 12); DNA binding / transcription initiation factor5624e-058
AT4G32551.1 LUG (LEUNIG); protein binding / protein heterodimerization/ transcription repressor1323e-008
AT1G06070.1 bZIP transcription factor, putative (bZIP69)1252e-007
AT1G25540.1 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator1207e-007
AT1G25540.2 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator1207e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members