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Information for unigene UN57991

FASTA Sequence
Unigene ID: UN57991Length: 608 SSR 
GGGATCGTCTTTACCTTTTGGTCCTTCTTCTCCGCTAGGTTTCTCTCAAACGAACAGATCCTCCATTCGTCTCAAAGTTACCTTGT
GCGATGAAGACAGCTAAGGGGAAAGGGAAAGCAGGAGGACAGAAATGGAAGTCAATGTCTCAGGCTGAAAAAGCTCCATATGAAGA
GAAAGCTGCAAAGAGGAAAGCTGAATACGAAAAGCTTATGGATGCATACAACAAAAGCATGGAGGAAGGGAGTGATGAATCTGAAA
ATTCTTTATCAGAAGTAAATGATGAAGATGAAGCTAGTGAAGAGGAAGAGAAGGTAAAGAAGGGAAAGGCAGGTGAGGATGACGAT
GATGATGATGATGAAGATGACGATGATGAAGATGACGAGGACGAGGAAGAAGACTAAACTGGAGATAGAGATCAGAGTTTGGATCT
CGAGGATAACTACAGGTTCAGAAGGCAGAAGTAAGTATATTTTGTATTTTGTGTGTTGACAACTATAGATCGAAATGGTGTGTTGT
GCTTTTTTTTCTTTTCTTTTCCTAAGAAAGCCAAACAGTTTCTTAGCGGTTCATGTAAGTTTATTTCATCTTTCTATCCACAACGT
ACACTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33790 unnamed protein product [Thellungiella halophila]4202e-039
NP_190756 high mobility group protein B1 [Arabidopsis thaliana]3978e-037
NP_974413 high mobility group protein B1 [Arabidopsis thaliana]3791e-034
XP_002877829 hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp. lyrata]3719e-034
NP_001190062 high mobility group protein B1 [Arabidopsis thaliana]3091e-026

Swiss-Prot top hits (Blast detail)Scoree value
P26585 HMG1/2-like protein2031e-015
P40621 HMG1/2-like protein1985e-015
P40620 HMG1/2-like protein1977e-015
P40619 HMG1/2-like protein1871e-013
P27347 DNA-binding protein MNB1B1771e-012

TrEMBL top hits (Blast detail)Scoree value
O49595 At3g51880/ORF133976e-037
Q3EAL6 AT3G51880 protein3797e-035
C6SVP1 Putative uncharacterized protein2613e-021
C6SXC8 Putative uncharacterized protein2613e-021
Q1EMR5 HMG-protein (Fragment)2605e-021

Arabidopsis top hits (Blast detail)Scoree value
AT3G51880.1 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3974e-039
AT3G51880.3 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3974e-039
AT3G51880.2 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3795e-037
AT1G20696.3 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor2343e-020
AT1G20696.1 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor2301e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members