Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN58121

FASTA Sequence
Unigene ID: UN58121Length: 741 SSR 
GGAATTTGGAAGAAGAGAAATCCGAGAAAATAGAGAGAGAGAGATCCTGGTTGATGCTGCAATCTAGTAGAGGTCAATAGAGAGTC
AGACGATTGATTACCCGCTGAATCATCTCCTTCTCTCGTTGAATCAACTAAAACAGCGAAAACCCTAGAGTAGAGAGAGGAGGGGG
AAAGATGAACAGGTTGAGGAATCTGGACGCTTACTCTAAAATCAATGAAGATTTTTACAAGCGTACACTTTCCGGTGGTGTCATCA
CCCTCGCTTCTTCCATCGTCATGTTCATTCTCTTCTTCTCCGAGCTTCGGCTTTATATGCACCCGGTGACGGAGACTCATCTCCGT
GTGGATACAACAAGAGGGGAGAAGCTACGCATCAATTTTGATGTTACATTCCCAGCGCTTCAGTGCTCCATTATTAGTATTGATAC
TATGGATATCAGCGGAGAGAGGCACCTCGATGTGCGGCATGATATATTTAAAAAAAGATTAGACTCTCACGGCAACGTCATCGAGG
CAAAACAAGGTGGAATTGGTCATACTAAGATTGAAAAACCTTTACAGAAACATGATGGAAGGTTGGAGGACAATGAAAAGTATTGC
GGTTCCTGTTTTGGAGCTGAAGAGACGGATGATGCTTGCTGTAACTCATGCGAGGAAGTTCGTGAAGCTTACCGAAAGAAATGTTG
GGGTCTCTCTGACCTGAATCATCGACCAGTGTAAACGGGAAGCTATGTGCAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564162 Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]8235e-086
NP_001031077 Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]8235e-086
XP_002893216 hypothetical protein ARALYDRAFT_472456 [Arabidopsis lyrata subsp. lyrata]8154e-085
XP_002306582 predicted protein [Populus trichocarpa]7393e-076
XP_002513896 Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis]7375e-076

Swiss-Prot top hits (Blast detail)Scoree value
Q803I2 Endoplasmic reticulum-Golgi intermediate compartment protein 33968e-038
Q66KH2 Endoplasmic reticulum-Golgi intermediate compartment protein 33951e-037
Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 33879e-037
Q6NVS2 Endoplasmic reticulum-Golgi intermediate compartment protein 33861e-036
Q5EAE0 Endoplasmic reticulum-Golgi intermediate compartment protein 33842e-036

TrEMBL top hits (Blast detail)Scoree value
Q2V4M1 Putative uncharacterized protein At1g22200.28234e-086
Q9LM16 F16L1.7 protein8234e-086
B9H750 Predicted protein7392e-076
B9RJH7 Endoplasmic reticulum-Golgi intermediate compartment protein, putative7373e-076
B8AUP2 Putative uncharacterized protein7241e-074

Arabidopsis top hits (Blast detail)Scoree value
AT1G22200.1 unknown protein8232e-088
AT1G22200.2 unknown protein8232e-088
AT1G36050.1 unknown protein7183e-076
AT1G36050.2 unknown protein7183e-076
AT3G20560.1 ATPDIL5-3 (PDI-LIKE 5-3); protein disulfide isomerase1781e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members