Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN58281

FASTA Sequence
Unigene ID: UN58281Length: 340 SSR 
ACACTCACCACATTCTCTCTCTCTCTCACTTGGCTCACAACACAAAAAACAAAGTGAAACTCTTTAGACGCATTAGAGATCAAAAG
ATGAACATAGCTCACACCATCTTCGGCGTTTTCGGAAACGCTACTGCTCTGTTTCTGTTCTTGGCTCCTTCGATAACATTCAAAAG
AATCATCAAGAACAAATCAACTGAACAGTTCTCTGGCATCCCTTACCCTATGACTCTCCTCAACTGTCTCCTCTCCGCTTGGTACG
GACTTCCCTTTGTGTCAAAAGACAACACGCTCGTGAGCACAATCAACGGAACAGGAGCAGCGATAGAGACAATCTACGTCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564140 Nodulin MtN3-like protein [Arabidopsis thaliana]4271e-040
XP_002893163 nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata]4271e-040
XP_002526178 conserved hypothetical protein [Ricinus communis]3777e-035
XP_002307476 predicted protein [Populus trichocarpa]3688e-034
XP_002265836 PREDICTED: hypothetical protein [Vitis vinifera]3633e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH5 Protein RUPTURED POLLEN GRAIN 12213e-018

TrEMBL top hits (Blast detail)Scoree value
Q8L9J7 Putative uncharacterized protein4278e-041
B9SJK9 Putative uncharacterized protein3775e-035
B9H7N2 Predicted protein3686e-034
B9GTN3 Predicted protein3614e-033
B9GTN5 Predicted protein3614e-033

Arabidopsis top hits (Blast detail)Scoree value
AT1G21460.1 nodulin MtN3 family protein4273e-043
AT3G14770.1 nodulin MtN3 family protein2293e-020
AT4G10850.1 nodulin MtN3 family protein2293e-020
AT5G40260.1 nodulin MtN3 family protein2212e-019
AT5G40260.2 nodulin MtN3 family protein2212e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members