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Information for unigene UN58424

FASTA Sequence
Unigene ID: UN58424Length: 748 SSR 
CACGAATGAATTCAACACTATCAATCTTACTTGTTACTTGACCTAAAAACTTTTGTATCAATATTACTCGCAAAGAGATGTAATCA
TTACACATAAAAAATAATCTTACAAGATTGAACCATCATGTTGTTGTGTCTGCCTTATGAAGCTAGCCAATGTCGCCTCCTTGAAG
AAGAAGAAGAAGAAGAAGCTGTTCTAAACAAAGCAAACGACGACCTGCTCCTACGGTTCACCTGTGATCTAGACCCGGATGCTACA
GATCCAGATGACCCGCTGAAACATCCGAAGAGTCTCATGATCCGACCCGCAAACCCACCCGATCTCTCTCCACTACTACCTCCTCT
TCTCGAAACCCCACGCTACTCTTCTCGGACGCCTCTCTTCTGCCAATCTCCCACCGTCAACCTCCGTGTACACCACCGGCATTCCT
CCTCTCCATCCACCGGGGATCCTCCCCACAGCGAATCCTCCGCCAGGCAACCTCCAAATCGTCATCCCCGCCGAGGAATCACCACT
ATCCTCCTCCGCAACCGTGGTGGTGGCTACATCCTCCTCCTCCGCGGGAAGCTCGTGGCGGCAAACGGGGCAGGAGTTACGAATCG
CGAGCCAGGGGAGGATGCAGTCGGGGTGGTAGATATGGTTACACGGCATCTCCCGAGCCTCGGAGCTGAGAAGGAACGTCTCTTTA
CAAACGGCGCAGTGAGACTGAGAATCCGATTCGAGATGAGTCGGAGCGATTTCGATCACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_030517 RING-H2 finger C2A [Arabidopsis thaliana]5772e-057
XP_002881672 hypothetical protein ARALYDRAFT_903223 [Arabidopsis lyrata subsp. lyrata]4732e-045
CAN70319 hypothetical protein VITISV_016758 [Vitis vinifera]4212e-039
XP_002283100 PREDICTED: hypothetical protein [Vitis vinifera]4212e-039
CBI31649 unnamed protein product [Vitis vinifera]4212e-039

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXD3 E3 ubiquitin-protein ligase AIP21898e-014
Q9SPL2 E3 ubiquitin-protein ligase CIP81834e-013
Q3T0W3 E3 ubiquitin-protein ligase RNF1811745e-012
Q9Y4L5 E3 ubiquitin-protein ligase RNF1151728e-012
Q6GPV5 E3 ubiquitin-protein ligase RNF1811728e-012

TrEMBL top hits (Blast detail)Scoree value
O22283 At2g39720/T5I7.25771e-057
A5BM57 Putative uncharacterized protein4212e-039
C5YYG0 Putative uncharacterized protein Sb09g0011004103e-038
B9FKA4 Putative uncharacterized protein4032e-037
Q65XW6 Os05g0110000 protein4032e-037

Arabidopsis top hits (Blast detail)Scoree value
AT2G39720.1 RHC2A; protein binding / zinc ion binding5778e-060
AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein3591e-034
AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein3582e-034
AT2G40830.2 RHC1A; protein binding / zinc ion binding2282e-019
AT2G40830.1 RHC1A; protein binding / zinc ion binding2282e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members