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Information for unigene UN58478
| FASTA Sequence |
| Unigene ID: UN58478 | Length: 832 |
SSR | | GAACTCTTCTTATGTATTACTGCCTCGCCGGAGACTTGACACAGTTTCTACCGTCCCTCGTTGAAAGAAAAAAAAAAGAAAGCAGA
AAAGAAAGCCTATGAAGAGGGAGGAGGACCAATGAATTTAGAAAACCAAGCCATGAGGGATTTTTTTTCTGGTTAGCTCTAAGCTG
ATGATGATATGATCAAAGTTTTTTCCTCATGGGCTTTGCTTTGTATGAAGATAAATCTAAGAGATTCCAGATCGTTCACCTTGATG
GCTCGCCTACAATATCGTGGTAAAAAACAAAAAGGAATGTACTAAGTAGCAATTCCTCTGTTTGGTTGTCTCTTGTTCACACTGTA
ACTGCCAACATAACCTGGAGATGAACTTCTACCTGAAACATCCGAGGAAGGACCTCCTCCTCCAATCCCATAGCTAAAAGAAGCAG
GCCCTTCCGTCTCAGGCGTCGGTGATCTCCACGTGGGATCACTATACACCGCACCATTCCCATAGAACTCTGCAAGTCCTGCTCCA
TCGTAACCAATGTTGTTGTTGGCAGCCGAGGCAGAAGAGAATGAAGACGACGACGGTGCTGCCGCCGCCTTGCTAGGAGGCCCTAT
GTTCCTCGCTGCATATCCACCTGTCCCCAACCCAAAGCCAGACTCACCGTTTCCTCCGTAACCAAACTTCACATTCTCGTTACTAC
CAACAACAGCATTGTTTCCTCCTCCTCCTCCAGGAGCACCCCAGTTTCCAAATGGACCGCTAAGAGTGTTGTTCCCACTTGTTGAT
CCTCCTCCTCCTCCCATGTATGTATAGAGTTTGAGTTGTTGTTGTTGTTGTTATAGTT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_566321 RNA recognition motif-containing protein [Arabidopsis thaliana] | 667 | 8e-068 |
| AAK92717 putative RNA-binding protein [Arabidopsis thaliana] | 667 | 8e-068 |
| XP_002882552 hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp. lyrata] | 659 | 7e-067 |
| NP_850539 RNA recognition motif-containing protein [Arabidopsis thaliana] | 654 | 3e-066 |
| AAF21191 putative RNA-binding protein [Arabidopsis thaliana] | 654 | 3e-066 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9UI36 Dachshund homolog 1 | 138 | 8e-008 |
| P51992 Heterogeneous nuclear ribonucleoprotein A3 homolog 2 | 132 | 4e-007 |
| P10496 Glycine-rich cell wall structural protein 1.8 | 121 | 8e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8W555 AT3g07810/F17A17_15 | 667 | 6e-068 |
| Q94A00 Putative RNA-binding protein | 667 | 6e-068 |
| Q9SFD3 Putative RNA-binding protein | 654 | 2e-066 |
| Q0WMC1 Putative RNA-binding protein (Fragment) | 217 | 8e-016 |
| A5C205 Putative uncharacterized protein | 211 | 4e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G07810.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 668 | 3e-070 |
| AT3G07810.2 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 654 | 1e-068 |
| AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding | 138 | 7e-009 |
| AT2G36120.1 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1) | 116 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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