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Information for unigene UN58748

FASTA Sequence
Unigene ID: UN58748Length: 722 SSR 
GGGTGATAGGGTTTTGTCCGAATCTCAAACAGAGAAGAGAAGGAGATCATGGTTCTAAAACCTTGCGCAGTTGCCTCAGCGACAGA
CAGAGGTTCGAGCAACTTGGAGGAGGCTTCGATGGAAGCATCTTCAGTGATTCTCAAACCTTGCGCAGCCGTGACGGCGAGGGATG
GGTGCTCGAGCGAGTTGGAGAGGGAGGCCATGGAGGTTTCATCGGGCGTTGACGATTCGCGCCAGAGAAAGCGTAAGGCTGAGCTC
GATCCAGAGGAAGAGAGCGATGGTGAGATTGAAGAAGGCAGAATTGAGGAGAGCGAGGATGATGATGACAAAGATCCCTTAGCGGT
GCCAGAGTGGGATGTGGACAGCTTCGATGGTGTGGTCTATACTTCCTCTTCGGAGCCTGATCGTGAAATCATGGAGAAAGCTATCA
ATGACTATCGCATCTGTAAAAAACAGCTCATCACCAGCAAGGGTTTCATGGTGGATCCATCGCTTAGGCCACATTATTTGTACAAA
AGAATCTTCCCGTTAAATTTTAACGACAGTGGATTCAACAGAGATTACTGTGAAAAGATAGTCTCTGTATGTCTTGAGAGGCATAA
CCAAGACAAAGCTAGTTCCTTTTCCTTACTTTATTAAGTTGGTTTTGTTTTTGTTTGCTAAAATCTGAATCATTCTCTCTCTCTCT
TTTTTTTATTTTGTGGTTTTGATTGGTTCAAGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872766 predicted protein [Arabidopsis lyrata subsp. lyrata]2052e-014
XP_002884528 hypothetical protein ARALYDRAFT_896658 [Arabidopsis lyrata subsp. lyrata]1641e-009
XP_002884526 hypothetical protein ARALYDRAFT_340742 [Arabidopsis lyrata subsp. lyrata]1542e-008
NP_683532 cystatin-related protein [Arabidopsis thaliana]1319e-006

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3EBC1 Putative uncharacterized protein At3g05685.11316e-006

Arabidopsis top hits (Blast detail)Scoree value
AT5G17150.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, embryo, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17120.1); Has 23 Blast hits to 23 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1395e-009
AT5G17090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17120.1); Has 28 Blast hits to 26 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1332e-008
AT3G05685.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17090.1); Has 28 Blast hits to 26 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1314e-008
AT3G05450.1 LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05685.1); Has 30905 Blast hits to 2528 proteins in 227 species: Archae - 0; Bacteria - 28079; Metazoa - 916; Fungi - 505; Plants - 127; Viruses - 92; Other Eukaryotes - 1186 (source: NCBI BLink).1271e-007
AT5G17120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17150.1); Has 47 Blast hits to 45 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).1271e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members