 |
Information for unigene UN58758
| FASTA Sequence |
| Unigene ID: UN58758 | Length: 767 |
SSR | | GGGAGAGTCAAGAGAGACTAAGGAAGAAGAAGAAGAAGATCGGAGATATCGAAGGTTTTGACTTTCTCTCACAACCCAAATCAAAT
CAATAGTGAGAGATTAAGCTATTGGATTTGGATATGTCGAGCTTAGCTGCTTCGTTGGTCACTGGGGTTGGCCTGATACCGCAAAG
GTCGCTTCTTTACCAGCCTACTTCCTTTCCTTCCTCCAGAAGGAACACTCACGGTGCTGTTAAGGCCTCTGCTCGGGTCGATAAGT
TCTCAAAAACCGATATCATTGTTTCTCCATCGATTCTATCTGCCAACTTCTCCAAATTGGGCGAGCAGGTAAAAGCTGTGGAGTTA
GCAGGTTGTGATTGGATTCATGTTGATGTGATGGATGGTCGTTTTGTTCCCAACATTACTATTGGACCGCTAGTGGTCGACACTCT
GCGCCCTGTTACAGATCTTCCGTTGGATGTTCATCTTATGATAGTGGAACCTGAGCAGAGAGTGCCTGATTTCATCAAAGCAGGTG
CAGATATAGTTAGTGTACATTGTGAGCAGTCCTCTACCATCCATTTACACCGTACAGTCAACCAAATTAAAAGCTTGGGAGCTAAA
GCTGGAGTTGTCCTTAATCCTGGCACTCCATTGACTGCAATTGAATATGTATTAGACTGTGTTGATCTGATCTTGATAATGTCTGT
GAACCCTGGGTTTGGTGGGCAGAGCTTATCGAAAGCAAGTGAGAAAATAGCAGACTTGAGAGATGTGTGTGGAGCTGGA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200949 D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana] | 918 | 5e-097 |
| XP_002866432 hypothetical protein ARALYDRAFT_919384 [Arabidopsis lyrata subsp. lyrata] | 917 | 7e-097 |
| CAN66664 hypothetical protein VITISV_031724 [Vitis vinifera] | 858 | 5e-090 |
| XP_002284772 PREDICTED: hypothetical protein [Vitis vinifera] | 858 | 5e-090 |
| CBI15200 unnamed protein product [Vitis vinifera] | 858 | 5e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q43843 Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) | 830 | 4e-088 |
| Q43157 Ribulose-phosphate 3-epimerase, chloroplastic | 812 | 5e-086 |
| Q9ZTP5 Ribulose-phosphate 3-epimerase, chloroplastic | 806 | 2e-085 |
| P74061 Ribulose-phosphate 3-epimerase | 572 | 3e-058 |
| O34557 Ribulose-phosphate 3-epimerase | 496 | 2e-049 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SAU2 Putative ribulose-5-phosphate-3-epimerase | 918 | 4e-097 |
| A5AF07 Putative uncharacterized protein | 858 | 3e-090 |
| B9N4C5 Predicted protein | 825 | 2e-086 |
| Q8S4X2 Ribulose-5-phosphate-3-epimerase | 825 | 2e-086 |
| C6TMB6 Putative uncharacterized protein | 815 | 3e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G61410.1 RPE; catalytic/ ribulose-phosphate 3-epimerase | 918 | 2e-099 |
| AT5G61410.2 RPE; catalytic/ ribulose-phosphate 3-epimerase | 918 | 2e-099 |
| AT3G01850.1 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 295 | 4e-027 |
| AT3G01850.2 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 295 | 4e-027 |
| AT1G63290.1 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 290 | 2e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
