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Information for unigene UN58796
| FASTA Sequence |
| Unigene ID: UN58796 | Length: 683 |
SSR | | GGAAGACACACCTCTCCTTCGCATCTTTCTTCTTTTTACTAAACAGAAAGGGAGGGAGAGAGAGAGAGATCGGAGAATACAATGGC
GTCGAACTCGCTCATGAGCTGCGGCATCGCCGCCGTCTACCCTTCCCTTCTTTCTTCTTCAAAGTCTAAATTCGTCTCCTCCGGAT
TTGCCCTCCCAAACGCCGGCAACGTTGGCCGTATCAGAATGGCTGCTCACTGGATGCCCGGCGAGCCACGTCCAGCTTACCTCGAC
GGTTCTGCTCCAGGTGACTTTGGGTTTGACCCTCTTGGACTTGGAGAGGTTCCAGAGAATCTTGAGAGATACAAAGAATCAGAGCT
CATCCACTGTAGATGGGCTATGCTTGCTGTCCCAGGGATTTTGGTACCAGAGGCTTTGGGATATGGAAACTGGGTGAAGGCTCAAG
AATGGGCAGCAGTACCTGGAGGACAAGCCACTTACTTGGGTAACCCGGTCCCATGGGGTACTCTGCCCACAATCTTGGCTATAGAG
TTCTTAGCTATTGCCTTTGTTGAGCACCAGAGGAGCATGGAGAAAGACCCTGAGGAAAAGAAGTACCCTGGAGGTGCATTTGACCC
TCTTGGATACTCCAAAGACCCCAAGAATTTTGAGGAGTTGAAAGTTAAGAGATCAAGACGGGAGGCTTGCGTTGTTGGCCT
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ33962 unnamed protein product [Thellungiella halophila] | 990 | 2e-105 |
| XP_002878004 hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp. lyrata] | 987 | 4e-105 |
| NP_191049 light-harvesting complex I chlorophyll a/b binding protein 1 [Arabidopsis thaliana] | 978 | 5e-104 |
| NP_001078288 light-harvesting complex I chlorophyll a/b binding protein 1 [Arabidopsis thaliana] | 978 | 5e-104 |
| AAG40043 AT3g54890 [Arabidopsis thaliana] | 968 | 7e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P12360 Chlorophyll a-b binding protein 6A, chloroplastic | 829 | 4e-088 |
| Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic | 720 | 2e-075 |
| Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic | 261 | 3e-022 |
| P14278 Chlorophyll a-b binding protein 4, chloroplastic | 257 | 9e-022 |
| P13851 Chlorophyll a-b binding protein 1, chloroplastic | 256 | 1e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MS75 Uncharacterized protein At3g54890.4 | 978 | 3e-104 |
| Q01667 AT3g54890 | 978 | 3e-104 |
| Q9C5R7 AT3g54890 | 968 | 5e-103 |
| B9HLM2 Light-harvesting complex I protein Lhca1 | 851 | 2e-089 |
| Q40512 Photosystem I light-harvesting chlorophyll a/b-binding protein | 848 | 4e-089 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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