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Information for unigene UN58898
| FASTA Sequence |
| Unigene ID: UN58898 | Length: 770 |
SSR | | GAGAGGGAAGGCTGCTCAGGTCAAGGCAAACATATTACGCTTTTCTGGTTACAAATGGCAAGGAGATGAGGACAAGGCAAAAGAAA
AAGTAAAAGAAAAGCTTGACAAATGCAACAAAGAAAAGTTGTGGGAGTTTTGCGATCTCTTTGACATATCAGTCTGCAAAGCTACA
AGAAGCAAAAGGAAGATATTGTTGTGAAGCTGTTTGACTTTTTGGAGAAACCTCATGCAACTACTGATATTCTGGTTAATGAGGAA
GAGAAGAGCGCAAAGCGCAAAAGAACTCCTAATAAAAAGTTCGCAAGTAGCCGGAAGTTCAACTTCAAAACGATCAGCAAAGAGCC
AAAAAAAGACTGATGAAGCAACAAGGAGTGACAAAAAGAGATCAACTCTTTCTGATGAGGAGTCTGAAGAAGAAGAGAAAGAGGAG
GAGGAGGCAGAGGAGAATGAAAACAGGATTCCTGATAAATCGGATGATGAGGCGCCTCAGCCTTCTGAAAGCGAGGAGAAGGATGA
ATCTGAGGAGGAGTCAGAGGAGGAAGAAACTAAGAAGAAGAAGCGTGTTGTTTCTAGGACAGTATCTGGTGGAAAGACAGCAGCAG
CAGCAGCAAGGAAATCAAGAAACAAGAAAGCTGAAGTCTCAGAGAAATCCAGTCCACCACCGAAGAAAGTTAGTCAAAGCGCTCAG
CAGAAACGTAAGAGGGTGATGACGACACGACGACAGTGATACAAGTCCAAAGCATCTTCCTCTAAGAGGAGAGACTGAAAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864406 hypothetical protein ARALYDRAFT_495653 [Arabidopsis lyrata subsp. lyrata] | 604 | 1e-060 |
| BAB09233 unnamed protein product [Arabidopsis thaliana] | 584 | 3e-058 |
| NP_200377 DEK domain-containing chromatin associated protein [Arabidopsis thaliana] | 584 | 3e-058 |
| BAH19445 AT5G55660 [Arabidopsis thaliana] | 584 | 3e-058 |
| AAM13123 putative protein [Arabidopsis thaliana] | 576 | 3e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54F38 Histone H3.v1 | 180 | 1e-012 |
| O14164 Eukaryotic translation initiation factor 3 subunit C | 162 | 1e-010 |
| Q8T6B4 ABC transporter F family member 4 | 158 | 3e-010 |
| P54696 Myosin-H heavy chain | 157 | 4e-010 |
| Q01538 Myelin transcription factor 1 | 152 | 2e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFC8 AT5G55660 protein (Fragment) | 584 | 2e-058 |
| Q9FM72 Genomic DNA, chromosome 5, P1 clone:MDF20 | 584 | 2e-058 |
| Q8RWF6 At4g26630 | 576 | 2e-057 |
| Q9SUA1 Putative uncharacterized protein AT4g26630 | 576 | 2e-057 |
| B9S9T4 Transporter, putative | 451 | 5e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G55660.1 LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26630.2); Has 348612 Blast hits to 121147 proteins in 2910 species: Archae - 1231; Bacteria - 38190; Metazoa - 148268; Fungi - 42547; Plants - 15024; Viruses - 2447; Other Eukaryotes - 100905 (source: NCBI BLink). | 584 | 1e-060 |
| AT4G26630.1 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink). | 576 | 1e-059 |
| AT4G26630.2 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink). | 576 | 1e-059 |
| AT5G03710.1 unknown protein | 141 | 3e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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