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Information for unigene UN58971
| FASTA Sequence |
| Unigene ID: UN58971 | Length: 795 |
SSR | | GGAGAGTGACGTTTGTTTGGACACGCCTTTGTTGCTTGGTCCCTTTATCTTTCTCTAAAATTTCCATCTCTCCCATGAACATATGA
AAAAAAAACCAAACCCACCACTAGTTAGTTGTTGGTGCTTCACCAATTGACTTGACAGACATAAAAGAAGAGAAAGTCTTTACTTA
TAGATCTGACAATCAGAAAACCAACAAAAGTTTCTTGCTCCTTTGCTCTTTGTCTTCTTTCTCTTCTCAGCATAACTCCACATCTT
CTCTCTCTTTTACCACAATCTCTTTTCTCTTTTCCTTTTGGGCAAAAATCAAGAAACAGAGAGAGAGAGAATCTTGTTATCTAGGT
GGGTTCTTGTTTTTGGGTGTTACCTTACTTTCTTTCTCCTTTTTAGCTATGGAATCTTGCTCTGTTCTTGAAGTAGACATCAACGG
AGAAGAAACTATCTTTCTCAATAAGCAAATCATATGCAAGTACTCTGGAACATTGAGGAAACTGCTTTGGAAGTCTACATGTTCTT
CCAGTGGTAACCTCAAGGCGATCTTCAATGACTTCCCTGGTGGAGCTGAAAGTTTTGAGCTTTTATCAAGATTCTGCTACAACAAC
TGTGAATGGACTACTGTGATGCCTTCAAATGTAGTCATGTTGCATTGTGCTGCTAAGTTCATGGAAGTCAATAAAGTCTTGGTACA
GACTGAGAAGTGTATGGAGGAGATTCGGTATTGGGCTTGGCCAGAGTTCTTCTTGGCTTGAAACAGTGTCAAGTACTCGAAACATC
CTCTGAGTGGCTGAGTCTTTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883342 hypothetical protein ARALYDRAFT_479725 [Arabidopsis lyrata subsp. lyrata] | 484 | 1e-046 |
| NP_188849 Phototropic-responsive NPH3 family protein [Arabidopsis thaliana] | 475 | 1e-045 |
| XP_002327917 predicted protein [Populus trichocarpa] | 317 | 3e-027 |
| XP_002515696 Root phototropism protein, putative [Ricinus communis] | 311 | 1e-026 |
| CBI17965 unnamed protein product [Vitis vinifera] | 310 | 2e-026 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C5J4 Putative uncharacterized protein At3g22104 | 475 | 9e-046 |
| B9MXU2 Predicted protein | 317 | 2e-027 |
| B9RPM7 Root phototropism protein, putative | 311 | 1e-026 |
| B9RXW3 Zinc finger protein, putative | 299 | 2e-025 |
| A5B1C6 Putative uncharacterized protein | 274 | 2e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G22104.1 phototropic-responsive NPH3 protein-related | 475 | 6e-048 |
| AT1G50280.1 phototropic-responsive NPH3 family protein | 223 | 1e-018 |
| AT3G19850.1 phototropic-responsive NPH3 family protein | 143 | 2e-009 |
| AT3G08570.1 protein binding / signal transducer | 131 | 4e-008 |
| AT2G47860.1 phototropic-responsive NPH3 family protein | 115 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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