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Information for unigene UN59045
| FASTA Sequence |
| Unigene ID: UN59045 | Length: 683 |
SSR | | AAGATTTATAGGGTCTCTCTCTCTCTCTTTCTTATCCAATGCAGCCGAAGCGTCGTCATTTACTGGCGTCTCGAGCTTCGAATCTA
TGGGTGATCCTTGGTCTAGGCATTGCTGGGGTTCTTCTAGTTACAAAGAAGCTGAAGAAGAGAGTTCGTGAAGACTTCGGTGCCTT
CATCGAGAAGCTTCTTCTGCTTCCTCCCCCTCAGCCTGCTCCTCCCAAAGCTCCTCATCCCCTCACTTCTCTCTCCTTCGCCGTCT
CCGACCTATTTGATGTTGAAGGCTACGTGTGTGGTTTTGGTCATCCAGAGTGGATTAGGACACATGAAGCTGCTGCTTCAACATGT
CCTGTGGTTTCACTTCTTGTTGAAGGTGGAGCTACATGTGTTGGGAAGACTGTTGTTGATGAATTTGCCTTCAGCATCAGTGGAGA
AACTAAGCATTATGATCCACCCACGAATCTTGCTGCCTCTGCTCATATCCCCGGCGGAGCTTGCAGTGGAGCTGCTGTTGCAGTTG
CTGCTAACCTTGTAGACTTTGCTTTAGGTATTGACACGGTTGGTGGGGTAAGAGTGCCAGCTGGATATTGTGGCGTTTTGGGATTC
AGATCATCTCAAGGGATTGTATCCACGCTGGAATCATACCAGTATCTTCTACTCTTGATGCTGTTGGATGGTTGCTCGGGA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_188424 translocon at the outer membrane of chloroplasts 64-III [Arabidopsis thaliana] | 835 | 2e-087 |
| XP_002282402 PREDICTED: hypothetical protein [Vitis vinifera] | 761 | 7e-079 |
| XP_002530483 amidase, putative [Ricinus communis] | 760 | 9e-079 |
| XP_002322105 amidase family protein [Populus trichocarpa] | 756 | 3e-078 |
| XP_002317872 amidase family protein [Populus trichocarpa] | 752 | 8e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A6VH97 Glutamyl-tRNA(Gln) amidotransferase subunit A | 245 | 2e-020 |
| Q6LX43 Glutamyl-tRNA(Gln) amidotransferase subunit A | 243 | 4e-020 |
| A4FW11 Glutamyl-tRNA(Gln) amidotransferase subunit A | 242 | 5e-020 |
| A9A9F2 Glutamyl-tRNA(Gln) amidotransferase subunit A | 238 | 1e-019 |
| Q2S4S2 Glutamyl-tRNA(Gln) amidotransferase subunit A | 234 | 4e-019 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G17970.1 atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III); binding / carbon-nitrogen ligase, with glutamine as amido-N-donor | 835 | 8e-090 |
| AT5G09420.1 ATTOC64-V (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V); amidase/ binding / carbon-nitrogen ligase, with glutamine as amido-N-donor | 560 | 6e-058 |
| AT1G08980.1 AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase | 471 | 1e-047 |
| AT3G25660.1 glutamyl-tRNA(Gln) amidotransferase, putative | 175 | 3e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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