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Information for unigene UN59085

FASTA Sequence
Unigene ID: UN59085Length: 732 SSR 
GGATACACACTCGAGCCTTTGTCTGTCTTTAGTCTTTATATGTGTTGTTTTTGCTTTTTCCTTCATTTCATATCTCCGCTTGGTTA
ACCAGCGACACATAGCAGAGAGAGGGTTCGAGTGTGGGAGGGAGCCCTAAACTTTGGGTGTTCATTTCGGAACCAGGTAGGTACGG
TGCTTGACTCATCTCTTATGATACTACACTCATTCTCTTGACTCTTCTCTTCTGAGGGTTTCCTTAGATTCCTACTTGAGTTGTTA
ATTGGGGTTTCCCTCTGTTGAATTTTCATGTTTTTTTTTGTTTTTTTGAATTTATGATTGAACCTTTTTTTTGCTGTTTGTATATC
TTTTACACTCTTACTGCTTGTTCCGTTCCTGACTAAAAAAAAAGCTTTGAGCTTTGTCTACAGTTAACATATCTCTCTTCTGTTCT
TTCGTGGAGAGAGAGAGAGAGAAGATGGATCACATTAGCAATCTACCAGACGAGGTTCTTTGTCATATTCTGTCTTTCCTTACTAC
AAAGGAGGCTGCTTTGACATCGATTCTCGCCAAGAGGTGGCGCAACCTTCTTGCATTTGTCCCTTGTCTCACCATTGATAACTCTG
AGTTTCTGCATCCTGAAAATGGTAAAGGGGACAGGGAAGACATTAAAGAGAGCTTCATGGACTTTGTGGATAGAGTTTTGGCGCTG
CAGGTACTCTCCACTTAGAATCTCTCTCGACTGTTTTATGGGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175674 F-box/LRR-repeat protein [Arabidopsis thaliana]3201e-027
NP_191441 putative F-box protein [Arabidopsis thaliana]3129e-027
Q9SSR7 RecName: Full=F-box/LRR-repeat protein At1g526503102e-026
NP_567414 putative F-box/LRR-repeat protein [Arabidopsis thaliana]3102e-026
NP_680364 putative F-box/LRR-repeat protein [Arabidopsis thaliana]3021e-025

Swiss-Prot top hits (Blast detail)Scoree value
Q9LXS0 Putative F-box protein At3g588203124e-028
Q9SSR7 F-box/LRR-repeat protein At1g526503107e-028
O23257 Putative F-box/LRR-repeat protein At4g139603107e-028
Q3E8L4 F-box/LRR-repeat protein At5g383963026e-027
Q2V3N5 F-box protein At3g590002963e-026

TrEMBL top hits (Blast detail)Scoree value
A8MS17 Uncharacterized protein At3g58900.32705e-022
C0Z399 AT3G58900 protein2705e-022
A0MF35 Putative uncharacterized protein (Fragment)2364e-018
O82216 Putative non-LTR retroelement reverse transcriptase2241e-016
A5BLF6 Putative uncharacterized protein1811e-011

Arabidopsis top hits (Blast detail)Scoree value
AT1G52650.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G13960.1); Has 1151 Blast hits to 1117 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3205e-030
AT3G58820.1 F-box family protein3124e-029
AT4G13960.1 F-box family protein3107e-029
AT5G38396.1 F-box family protein3026e-028
AT3G59000.1 F-box family protein2963e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

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