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Information for unigene UN59203
| FASTA Sequence |
| Unigene ID: UN59203 | Length: 777 |
SSR | | GGACAACACAACACGACACAACACAACACCTTCTTCTCTTTTCCCCCATTATCTCCTTCCTTCCTTCTCCGACAATGGCTACTTTC
CTAACAGCTGTCGTTTCAATCAAACCCACACTCTTCTCATTCCACTCCGAGTCCTCCCCCTCTTTGCAATCTCAAACCAATGCATT
CGCTCCCAAGGCCAAAGCCTTTCCTTCTGTCCCCTCGCGCCACGTTGGAGACCGAAGAAAAACCCGCTTTGGACCCTAACGCAGAA
TCCTCAAGACGCGTCTACATCGGAAACATACCAAGAACCGTAACTAACGAACAGCTCACCAAACTCGTCGAAGAACACGGCGCCGT
TGAACAAGTCCAGGTGATGTATGATAAGTACTCAGGAAGAAGCCGTAGGTTTGGTTTCGCTACAATGAAATCAGTTGAAGATGCCA
ATGCTGTCATTGAGAAGTTGAACGGCACTACAATTGAAGGACGTGAGGTGAAGGTTAATATTACAGAGAAGCCTCTAGAATTATCA
TCATCATCATCATCGTCTCCTGATTTGTCGCTGCTTCAGTCTGAAGATTCAGCTTTTGTGGATAGTCCTTACAAAGTGTATGTAGG
GAATCTGGCAAAGAGTGTTACTAAAGAGATGCTTGAGAATTTGTTTTCTGAGAAAGGGAAAGTTCTGAGTGCTAAGTTTCGAGAGT
GCCTGGTACTTCGAATCTACTGGGTTTGGGTTTGTTACGTTTCTTCTGATGAGATGTCGAAGCTGCTATTTGGCTCTTACAACTCT
TTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876128 hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp. lyrata] | 686 | 4e-070 |
| NP_566958 RNA recognition motif-containing protein [Arabidopsis thaliana] | 670 | 3e-068 |
| BAH19693 AT3G52150 [Arabidopsis thaliana] | 666 | 9e-068 |
| CAB41335 putative protein [Arabidopsis thaliana] | 630 | 1e-063 |
| XP_002265629 PREDICTED: hypothetical protein [Vitis vinifera] | 491 | 2e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82277 30S ribosomal protein 2, chloroplastic | 489 | 1e-048 |
| Q08935 29 kDa ribonucleoprotein A, chloroplastic | 263 | 2e-022 |
| P49313 30 kDa ribonucleoprotein, chloroplastic | 258 | 9e-022 |
| P19684 33 kDa ribonucleoprotein, chloroplastic | 257 | 1e-021 |
| Q9ZUU4 Ribonucleoprotein At2g37220, chloroplastic | 255 | 2e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYM4 Putative uncharacterized protein At3g52150 | 670 | 2e-068 |
| B9DG26 AT3G52150 protein | 666 | 6e-068 |
| Q9SUZ0 Putative uncharacterized protein F4F15.260 | 630 | 1e-063 |
| A9PJ20 Putative uncharacterized protein | 389 | 9e-036 |
| B9HNK5 Predicted protein | 388 | 1e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G52150.1 RNA recognition motif (RRM)-containing protein | 670 | 1e-070 |
| AT3G52150.2 RNA recognition motif (RRM)-containing protein | 670 | 1e-070 |
| AT3G52380.1 CP33; RNA binding | 275 | 9e-025 |
| AT2G37220.1 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | 255 | 2e-022 |
| AT4G24770.1 RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding | 207 | 7e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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