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Information for unigene UN59313

FASTA Sequence
Unigene ID: UN59313Length: 742 SSR 
CCGTACTCCAGCACAATTTGACCAGATGAATTCTGAGATTCCCTTGGCATATCCACATATAAAAGTTCTTCCAAAGTCCCACTTTC
ATACTTAATCTTGAAAAGCCGCGGGAGAACTTCGGCGGTTGCCTCAAAACCACGTCCAGGCTTTCGGTTGCATATCTCACAGTGCC
ACACATCCTGAGGGAAAACGCCAGTTGTTTGCCGGCCACCGCCATACATAGAAACGCACCATCTCTTCTTGGCATTAGGAGCAAAG
AACTCAGCTACAAATTTCCTCCAGAACTCAATGTTATTGTCTTCAGGCCTATGTTGTTGTCGGTACATATACTGTGTAAGACGCTG
AGCACCCATGCCTGGTTCATACACTGGTTTCGTAGGTGGCCTCAGAGGTTGGGGTAATTGAGGACGTTGTTGTTGTTGAGGCATTG
ATTTGAGGAGTTGTTGCTGCTGTTGGAGTTGCATAAGTCTCTGCTGCTGAAATATATTATTCATCTGAGCCTGCGAAGAAGATTGC
CCAGGCATTTGAAGAAACTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCCTCTGCTGCTGCTGCTGCTGCTG
CTGTTGAAGAAACAATGACTGCTCTGAATGTTGTTGAGGCTCCATTTTCACTTGGGCCATGCTTCTCATTCCCTGAAGTTGCTGCG
GTTCCAGCTTAACCGATCCTAGGTTTCTCAACATTTTCTGTTGCTGCTGGTCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175051 SEUSS transcriptional co-regulator [Arabidopsis thaliana]10663e-114
XP_002300947 predicted protein [Populus trichocarpa]9436e-100
XP_002893967 hypothetical protein ARALYDRAFT_891365 [Arabidopsis lyrata subsp. lyrata]9231e-097
XP_002265920 PREDICTED: hypothetical protein [Vitis vinifera]9212e-097
XP_002520244 Transcriptional corepressor SEUSS, putative [Ricinus communis]8702e-091

Swiss-Prot top hits (Blast detail)Scoree value
Q8W234 Transcriptional corepressor SEUSS10662e-115
Q55F68 Adenylate cyclase, terminal-differentiation specific2481e-020
Q54UW4 Bromodomain-containing protein DDB_G02807772481e-020
Q552X2 Putative mediator of RNA polymerase II transcription subunit 262443e-020
Q86AF2 Putative uncharacterized protein DDB_G02716062354e-019

TrEMBL top hits (Blast detail)Scoree value
B9GTN7 Predicted protein9434e-100
B9S2M5 Transcriptional corepressor SEUSS, putative8701e-091
Q6H972 SEU3A protein8611e-090
Q6H971 SEU3B protein (Fragment)8468e-089
Q2R939 Expressed protein7501e-077

Arabidopsis top hits (Blast detail)Scoree value
AT1G43850.1 SEU (seuss); DNA binding / protein binding / protein heterodimerization/ transcription cofactor10662e-116
AT1G43850.2 SEU (seuss); DNA binding / protein binding / protein heterodimerization/ transcription cofactor10662e-116
AT5G62090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: SLK1 (SEUSS-LIKE 1); transcription regulator (TAIR:AT4G25520.1); Has 38202 Blast hits to 15459 proteins in 742 species: Archae - 6; Bacteria - 1392; Metazoa - 14682; Fungi - 3752; Plants - 2341; Viruses - 407; Other Eukaryotes - 15622 (source: NCBI BLink).4702e-047
AT5G62090.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: SLK1 (SEUSS-LIKE 1); transcription regulator (TAIR:AT4G25520.1); Has 38202 Blast hits to 15459 proteins in 742 species: Archae - 6; Bacteria - 1392; Metazoa - 14682; Fungi - 3752; Plants - 2341; Viruses - 407; Other Eukaryotes - 15622 (source: NCBI BLink).4702e-047
AT4G25520.1 SLK1 (SEUSS-LIKE 1); transcription regulator4371e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members