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Information for unigene UN59355

FASTA Sequence
Unigene ID: UN59355Length: 783 SSR 
CCTAAAAACCATAAGGGTGCTTCAAGTGCGGCCACAAATGTTAAATCGTCTACACAACGAAAGCTACTACTCGCAAGCTTCTTCCT
CTCTCAGACTCTACCAAAAGTTAAAAAAAAAACAAAAAAAAAAACCACCTGCTTGTAAAACAACAACTCCAGGCAAAAACAACAAG
CAAATTACATTCTCTAATATATTTTGACTAGTGACTGACGATAGGCAAATGGGGATAGAGAGACTAGATTTATGTGCTATGTGATC
AGGCCTTAACCTCCTCTCCACCACCACCACCAGCTTTCTCTTTCTCAGCACCCTCTTCTTCTTCTTCATCAGCTATCTTATTGAGC
TCATCTTGGATCATCAGCTTTATCGATGATTTTTTCGACGTGAGATCAATATCGAACTTCCCAACTAGTCTCTCGAGGATGTCCAT
GAACGTGGACGTGTTGAAGTCCACCATTTTCAAGATGTCAACAATTGCAATTTTCAACTCCTCTTCACTAGGTTCCTTGTTCTTTT
TGTCTTTCCCTTTTCCCCCTCTTTTTCCTGCTTTCTCTTTGGATGCAGATTTTGAAGGAACGGAGGACTGCTCCTTGGCCGGTTTT
TCAGTCTTCTTCCTCTTAGAGGAAGATGCCTTTGGACTTGTATCACTGTCGTCGTTGTCGTCATCACCCTCCTTACGTTTTCCTGC
TGAGCGCTTTTGACTAACTTTCTTCGGTGGTGGACTGGATTTCTCTGAGACTTCAGCTTTCTTGTTTCTTGATTTCCTTGCTGCTG
CTGCTGCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864406 hypothetical protein ARALYDRAFT_495653 [Arabidopsis lyrata subsp. lyrata]5711e-056
BAB09233 unnamed protein product [Arabidopsis thaliana]5162e-050
NP_200377 DEK domain-containing chromatin associated protein [Arabidopsis thaliana]5162e-050
BAH19445 AT5G55660 [Arabidopsis thaliana]5162e-050
AAM13123 putative protein [Arabidopsis thaliana]4661e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q54T81 Probable H/ACA ribonucleoprotein complex subunit 41234e-006
Q9U7E0 Transcriptional regulator ATRX homolog1225e-006

TrEMBL top hits (Blast detail)Scoree value
B9DFC8 AT5G55660 protein (Fragment)5162e-050
Q9FM72 Genomic DNA, chromosome 5, P1 clone:MDF205162e-050
Q8RWF6 At4g266304661e-044
Q9SUA1 Putative uncharacterized protein AT4g266304661e-044
B9S9T4 Transporter, putative3988e-037

Arabidopsis top hits (Blast detail)Scoree value
AT5G55660.1 LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26630.2); Has 348612 Blast hits to 121147 proteins in 2910 species: Archae - 1231; Bacteria - 38190; Metazoa - 148268; Fungi - 42547; Plants - 15024; Viruses - 2447; Other Eukaryotes - 100905 (source: NCBI BLink).5437e-056
AT4G26630.1 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink).4675e-047
AT4G26630.2 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink).4675e-047
AT3G48710.1 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63550.2); Has 48226 Blast hits to 25734 proteins in 1103 species: Archae - 54; Bacteria - 6881; Metazoa - 21026; Fungi - 4604; Plants - 1514; Viruses - 306; Other Eukaryotes - 13841 (source: NCBI BLink).2264e-019
AT5G63550.1 EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48710.1); Has 115795 Blast hits to 50006 proteins in 1760 species: Archae - 230; Bacteria - 10317; Metazoa - 57515; Fungi - 12631; Plants - 4292; Viruses - 1075; Other Eukaryotes - 29735 (source: NCBI BLink).2202e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members