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Information for unigene UN59357
| FASTA Sequence |
| Unigene ID: UN59357 | Length: 664 |
SSR | | GAACAAAGCAGATCAATCATGTGATTTGATTTGTCACTTTCAACAAGTTTCATTTTAATTTGCAGAAATTAAGAAACAAAAATAAC
CAAAAAATGGTGATAATGTGATCTATACTAAATCTGTTACAGCTTTTACAAGACCGTTTTCTCTTACTTGGAAGATAAGATACCAG
AAACCAAGTCAACATCATCATCACTATCTTCAACATCATCATCCTCGGAATCCAAATCAGAAACCTGATCCAAGTAGCTACGGTGA
TGATGATGATGAGAGCTCCAATCAGGTGGGAAAGTCTTCTGCAATGTCTCTGTGAGCTCACCACCAGAACCTTCTATCTTACACAG
ACATCTAGACCAGCGAACCGCAGTTCCCATATCAACGATCAAACCTGCTTCCACCATTTCCTTGCAGATCGACATGACTCCCGAGT
AAATGTAGCCTTCTGCCATCGAAGCACGTGACAGAAGCGATGTCATAAGGCAGTGATACACAGCTTTATCCGGTTTTAGCCCCACC
GCTTTCATCTCTTCGTAGCAGTTCAAGGCTTTCTCCGGAAGAGAAGCTCGAGCCCATCCTTTTATTAAAGTCGTGTACGTCTTCAC
GTTTGGTTTCACCCCTATTGCTTCCATCTCTTGGATTGTTTGTGTAGCTCTATTCATGTCGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871115 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 768 | 1e-079 |
| BAB08985 membrane-associated salt-inducible protein-like [Arabidopsis thaliana] | 755 | 3e-078 |
| NP_568141 pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] | 755 | 3e-078 |
| AAL11611 AT5g04810/MUK11_13 [Arabidopsis thaliana] | 755 | 3e-078 |
| XP_002269194 PREDICTED: hypothetical protein [Vitis vinifera] | 596 | 9e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0WMY5 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic | 755 | 2e-079 |
| Q84J71 Pentatricopeptide repeat-containing protein At2g17670 | 142 | 2e-008 |
| Q9FIX3 Pentatricopeptide repeat-containing protein At5g39710 | 135 | 1e-007 |
| Q8GYM2 Pentatricopeptide repeat-containing protein At5g18950 | 131 | 4e-007 |
| Q8L844 Pentatricopeptide repeat-containing protein At5g42310, mitochondrial | 125 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HKM1 Predicted protein | 582 | 3e-058 |
| B9HVL0 Predicted protein | 578 | 7e-058 |
| B9RPX5 Pentatricopeptide repeat-containing protein, putative (Fragment) | 531 | 2e-052 |
| C5YAP4 Putative uncharacterized protein Sb06g033480 | 496 | 2e-048 |
| Q1G1I8 Pentatricopeptide repeat protein | 494 | 4e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein | 755 | 1e-080 |
| AT2G17670.1 pentatricopeptide (PPR) repeat-containing protein | 142 | 2e-009 |
| AT5G39710.1 EMB2745 (EMBRYO DEFECTIVE 2745) | 135 | 1e-008 |
| AT5G18950.1 pentatricopeptide (PPR) repeat-containing protein | 131 | 3e-008 |
| AT5G42310.1 pentatricopeptide (PPR) repeat-containing protein | 125 | 2e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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