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Information for unigene UN59555

FASTA Sequence
Unigene ID: UN59555Length: 741 SSR 
GGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAGTGATGGCAGCCATTGGAGGAGATGGTGGT
GATCTGGAGAACCGAATGTCGGCGAAGCATCACCGAGGGGTCGGAAGCAAAGGCGTTGATCGGACCGGATTCGGTCCCCCGCCTAG
GCCTGCGCCGTTGGTGTACTCTGATTTAACCGGCGATGACGTCGCTTCTTCGTCGCAGTGGACGTCGTGGCTTGTTCCGATGTTCG
TCGTCGCTAACGTGATGGTCTTCGTCGCTACGATGTTTGTCAACAACTGTCCCGCGCATTCCCACGGTCCTAACCGCCACTGTGTC
GCTACTTTCCTCGGGAGACTCTCCTTCGAGCCTCCCCGTAACAACCCTCTCTTCGGTCCCTCTTCTCGCACATTGGAGAAGTTAGG
ATCACTTGAGTGGGACAAAGTTGTGGGGAAGCATGAAGCTTGGCGTCTCTTGACTTGTATATGGTTACACGCCGGTGTTATTCATC
TTGCTGCTAATATGTTAAGCCTTGTGTTCATCGGTATTCGCCTTGAGCAGCAATTTGGCTTCGTTAGGATTGGAGTTATATACTTA
ATGTCTGGAATGGGAGGAAGCATCTTGTCTTCTCTGTTTATCAGAAACAGTATCTCTGTTGGAGCTTCTGGTGCTCTTTTTGGACT
TCTTGGCTCATGCTTTCTGACTTCTCACCAACTGGACTATCTACTCTAACAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196342 RHOMBOID-like protein 3 [Arabidopsis thaliana]8002e-083
NP_001119182 RHOMBOID-like protein 3 [Arabidopsis thaliana]8002e-083
XP_002873304 rhomboid family protein [Arabidopsis lyrata subsp. lyrata]7922e-082
XP_002279077 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]6561e-066
XP_002279126 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]6561e-066

Swiss-Prot top hits (Blast detail)Scoree value
P54493 Rhomboid protease gluP1763e-012
Q6IUY1 Rhomboid-like protease 31736e-012
Q9NX52 Rhomboid-related protein 21592e-010
Q6GV23 Rhomboid-like protease 51522e-009
A0JPA1 Rhomboid family member 21494e-009

TrEMBL top hits (Blast detail)Scoree value
B3H7G3 Uncharacterized protein At5g07250.28002e-083
Q9LYP1 AT5g07250/T28J14_1908002e-083
B9I4A7 Predicted protein (Fragment)6452e-065
A5AR09 Putative uncharacterized protein6406e-065
B9ID63 Predicted protein6406e-065

Arabidopsis top hits (Blast detail)Scoree value
AT5G07250.1 ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)8001e-085
AT5G07250.2 ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)8001e-085
AT1G63120.1 ATRBL2 (Arabidopsis thaliana Rhomboid-like 2); serine-type endopeptidase6387e-067
AT2G29050.1 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)5535e-057
AT2G29050.2 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)5535e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members