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Information for unigene UN59559

FASTA Sequence
Unigene ID: UN59559Length: 707 SSR 
GGAAGGAGGTATGGATGCTATTAAGCTTGAAGGAGGGTCACCATCAAGGATCACTGCTGCTAGATCCATTGTGGAAGCAGGGATTG
CGGTTATGGGACATGTTGGGTTGACTCCTCAAGCTATAAGTGTTCTTGGTGGTTTCAGACCACAAGGGAGGAACATAGCTAGTGCT
GTTAAGGTTGTGGAAACTGCAATGGCCTTACAAGAAGCTGGATGTTTTTCAGTTGTTTTAGAATGTGTTCCACCTCCTGTGGCTGC
TGCTGCAACCTCTGCTCTTCATATTCCAACCATTGGCATTGGAGCTGGTCCTTTCTGCAGTGGACAGGTTTTAGCCTACCATGACC
TTCTGGGAATGATGCAGCATCCCCATCATGCCAAGGTTACTCCAAAGTTTTGTAAGCAGTACGCTCAAGTAGGAGAAGTGATCAAC
AAAGCACTCTTGGAATATAAGGAAGAAGTATCCAAACACTCGTTTCCAGGTCCTTCTCACAGCCCTTACAAGATCTCCTCCAACGA
CCTGGATGGATTCTTAAGCGAGTTACAGAAACTGGGGTTGATGAGGCTGCTTCTGCTGCTGCTGCTGCTGCATCAGCTGAGAAGAT
GCAGTCTTCAGTGTCACTGTCTTTTCCGTGACAAGCTTGAGAAGTTCTCTTCATTATGAGTAGACAGACGTGGTTTGAAGAAATAA
AAGTCCTATATAGATTTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191712 Phosphoenolpyruvate carboxylase family protein [Arabidopsis thaliana]9257e-098
XP_002878388 hypothetical protein ARALYDRAFT_486638 [Arabidopsis lyrata subsp. lyrata]9176e-097
NP_182135 ketopantoate hydroxymethyltransferase 1 [Arabidopsis thaliana]8782e-092
XP_002882051 KPHMT1/PANB1 [Arabidopsis lyrata subsp. lyrata]8721e-091
XP_002320828 ketopantoate hydroxymethyltransferase [Populus trichocarpa]8656e-091

Swiss-Prot top hits (Blast detail)Scoree value
Q729A6 3-methyl-2-oxobutanoate hydroxymethyltransferase4433e-043
A1VBJ4 3-methyl-2-oxobutanoate hydroxymethyltransferase4433e-043
B0TC10 3-methyl-2-oxobutanoate hydroxymethyltransferase4262e-041
Q2RM79 3-methyl-2-oxobutanoate hydroxymethyltransferase4146e-040
Q3A9L0 3-methyl-2-oxobutanoate hydroxymethyltransferase4083e-039

TrEMBL top hits (Blast detail)Scoree value
Q9M315 3-methyl-2-oxobutanoate hydroxy-methyl-transferase-like protein9255e-098
O82357 3-methyl-2-oxobutanoate hydroxy-methyl-transferase8781e-092
B9I8Q3 Ketopantoate hydroxymethyltransferase8654e-091
B9RDY4 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative8502e-089
C5XKA9 Putative uncharacterized protein Sb03g0012008261e-086

Arabidopsis top hits (Blast detail)Scoree value
AT3G61530.1 PANB2; 3-methyl-2-oxobutanoate hydroxymethyltransferase9253e-100
AT3G61530.2 PANB2; 3-methyl-2-oxobutanoate hydroxymethyltransferase9253e-100
AT2G46110.1 KPHMT1 (KETOPANTOATE HYDROXYMETHYLTRANSFERASE 1); 3-methyl-2-oxobutanoate hydroxymethyltransferase8789e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members