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Information for unigene UN59616
| FASTA Sequence |
| Unigene ID: UN59616 | Length: 788 |
SSR | | GGGGCGTCAGTGCCCTTTTCATAAATAAATTAGGTTACTACTGATCACGGGTCGAAGCACCTTACTGCCCAGGAGGAATCGCTAAT
TCATCCGAAGAGTCGCTACCTCTCTCTCTCTCCGTCTTTTCTCCAAACCCATATCTGATATACATCTGTGATGGATCCAGCACAGA
ACGCAAGCGCAGCTGGGATTGGTGGAAGCAATGGTACAACGGCGATGGGATATGATGGAACTGCAACTGCGTCTGAAGATTCGAAA
GAGAATCTGAACCAAGTCATAAACTCAATTCAGAAGACTTTGGGACTCCTTCATCAGTTACACCTTACTGTCTCTTCTTTCACTCC
CGCTTCTCAGCTTCATCTCCTCCAGCGCCTCAACTCTCTCGTGTCGGAGCTGAATAGCATGGCTAAGTTGTCAGAGAAATGCAACA
TTCAAGTCCCCATGGAGGTTATTAGCTTGATTGATGATGGAAAGAACCCGGATGAGTTTACAAGAGATGTTATTAATAGCTGCGTT
GCCAGGAATCAAGTTACAAAGGGCAAGACTGATGCTTTTAAGGATTTGAGAAAACATATTCTGGAGGAGCTTGAAGAGACTTTCCC
TGATGAAGTTGATAAGTACAGAGAGATCCGTGCTGCTTCTGCCGCTGAAGCAAAACGGCAGCGCAATCGCAAAGTGTCTTGTTACC
CAACGGGGATGCTAAGTCAAGACGAGCTATAAGTTTCTCCTCTTGGTCTTCTCACCTTTGGAGACCAAGTTTCTGAGTTATTTAAC
GACAGCAGACGATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893389 T24P13.4 [Arabidopsis lyrata subsp. lyrata] | 703 | 5e-072 |
| NP_564254 Mediator complex, subunit Med10 [Arabidopsis thaliana] | 688 | 3e-070 |
| AAF87025 T24P13.4 [Arabidopsis thaliana] | 683 | 1e-069 |
| NP_973916 Mediator complex, subunit Med10 [Arabidopsis thaliana] | 677 | 5e-069 |
| CBI34587 unnamed protein product [Vitis vinifera] | 625 | 5e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q16G71 Mediator of RNA polymerase II transcription subunit 10 | 242 | 6e-020 |
| Q7Q5R5 Mediator of RNA polymerase II transcription subunit 10 | 240 | 1e-019 |
| Q9GYU7 Mediator of RNA polymerase II transcription subunit 10 | 196 | 1e-014 |
| Q54GE5 Putative mediator of RNA polymerase II transcription subunit 10 | 167 | 3e-011 |
| P45966 Mediator of RNA polymerase II transcription subunit 10 | 141 | 3e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93WN1 At1g26660/T24P13_4 | 688 | 2e-070 |
| Q9LQY6 T24P13.4 | 683 | 7e-070 |
| Q3ED58 Putative uncharacterized protein At1g26665.2 | 677 | 4e-069 |
| B9GK75 Predicted protein | 624 | 5e-063 |
| B9SPF4 Nut2, putative | 608 | 4e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G26665.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | 688 | 1e-072 |
| AT1G26665.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | 677 | 2e-071 |
| AT5G41910.1 RNA polymerase II mediator complex protein-related | 584 | 1e-060 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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