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Information for unigene UN59667
| FASTA Sequence |
| Unigene ID: UN59667 | Length: 583 |
SSR | | GGGTTGATCTTTAGACGAGTTATGGGGAAAGAGAGCAGCAAAGCCTCGAGCTTGAAAGCAGAGCAGAAAGTTATTGTTCTCCGTTC
GGTCGCTCAGTACTTGGAGCGATGTGGGTTTTCTAAATGCTTCAAGAAGCTTCTCTCCGAAGCTGAAATCGAGAAGAAGGAGTTGA
ACAGTAGCTTACCGGATTTAGAGGAAGTTTTCTGCGATTTTTTTAACAAGAGCCATGTTGAAGAATCTGGTGATGATAATGAGGAT
GGGAAGAAGAAGAAAGCAGCAAGTGTAGATGAGAATGCATCTGTTGATCACCAAAAGGACGAGAAGAAAGATAAGAAGAAGAAGAA
AAAGAAGGAACCAGAACTGGAGGTAACTAAGGAGGAGGAGGAGGAGAAGGTCAAAGAGACTGATGCTGAGATTGAAGACGGACTGA
AAGAGAAAAAGAAGAAGAAGAAGAAGAAAACCAAGTCTGAGTCTTTGGTTGAAGATGAGGAGGAAGGAAGAGAATGTAGTGGAAGA
AACGCCTGTTAAGCAGCAGGCTGATGATGTTCAGGAAAACGGTAACGTTGAGAAAAGCGAAAAGAAA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_200522 uncharacterized protein [Arabidopsis thaliana] | 329 | 6e-029 |
| AAM61154 unknown [Arabidopsis thaliana] | 325 | 2e-028 |
| XP_002866185 hypothetical protein ARALYDRAFT_495806 [Arabidopsis lyrata subsp. lyrata] | 322 | 4e-028 |
| XP_001232086 PREDICTED: hypothetical protein [Gallus gallus] | 168 | 3e-010 |
| XP_001068849 PREDICTED: hypothetical protein [Rattus norvegicus] | 166 | 5e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LU74 AT5g57120/MUL3_6 | 329 | 4e-029 |
| Q8LFX8 Putative uncharacterized protein | 325 | 1e-028 |
| B9RWZ8 Cylicin-2, putative | 188 | 9e-013 |
| C3YUC1 Putative uncharacterized protein | 162 | 1e-009 |
| Q18401 Putative uncharacterized protein | 162 | 1e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949 Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria - 8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548; Other Eukaryotes - 32748 (source: NCBI BLink). | 329 | 3e-031 |
| AT1G56660.1 unknown protein | 134 | 1e-008 |
| AT5G60030.1 unknown protein | 130 | 4e-008 |
| AT5G65900.1 DEAD/DEAH box helicase, putative | 125 | 1e-007 |
| AT5G27120.1 SAR DNA-binding protein, putative | 124 | 2e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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