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Information for unigene UN59683

FASTA Sequence
Unigene ID: UN59683Length: 732 SSR 
GGGCTCTCTCTCATAAAATAATATCTCTCCTCTCTTTCTTTCTGTGTAGCCCGATAATATTTCGACACCTGTGTTGCTCACTCTCT
TTTGTGTCTCCTCCTCTTTCTTCTTACCTAGATTTTGAGACGAGGAGATTCTCAGTTTCCAAGGGGTTTCTTTGCTTACATAACTT
CTCCCTCTCCGTCTTTCAGATCCATCAGAAAGGTGTTCTTGCTCTTGCTCACTCTTGAAGATGGACAGAGCAGACACGTGGGGGTT
TGTCAGTGGTGGGAGATGTTTATATCTCAAGTTGCTTTTATGATTTTAGCTTACAAGAGATGTGTAGTGGCAGGGTGCACAAAGAG
CGCTCGTGGGAGGACTGATTGTTGTGTGAAGCATGGTGGTGGGAAACGGTGCAAGTCTATTGGGTGTGAGAAGAGTGCGCAAGGTA
GCACTGACTTCTGCAAGGCGCATGGTGGAGGTAAACGGTGCTCTTGGGGAGGAGAGTGGAAATGCGAGAAGTTTGCTAGAGGGAAG
AGTGGTTTGTGCGCTGCGCATAACAGTATGGCTCAGGAGAAAGGTGGAAGCAAGATTGGTTTGATTGGTCCTGGACTTTTCCGTGG
CCTTGTCTCTACCTCGTCTCAAACCACTACTACTACTACTACACTGATCATTCTCAGTCTGGAGTCAGTGCGGTCTCTGACTGCAC
AGACTCCATTTATCGTTCAACCAGATGCATTATCATCATGAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866619 hypothetical protein ARALYDRAFT_358659 [Arabidopsis lyrata subsp. lyrata]5862e-058
NP_201260 loricrin-related protein [Arabidopsis thaliana]5808e-058
XP_002873415 hypothetical protein ARALYDRAFT_908918 [Arabidopsis lyrata subsp. lyrata]4642e-044
XP_002299680 predicted protein [Populus trichocarpa]4624e-044
XP_002513710 conserved hypothetical protein [Ricinus communis]4517e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q9SZ67 Probable WRKY transcription factor 192434e-020

TrEMBL top hits (Blast detail)Scoree value
Q9FLG3 Emb|CAB89363.15805e-058
B9GF89 Predicted protein4623e-044
B9RIZ1 Putative uncharacterized protein4515e-043
A5B6J0 Putative uncharacterized protein4506e-043
B9GZS4 Predicted protein4452e-042

Arabidopsis top hits (Blast detail)Scoree value
AT5G64550.1 loricrin-related5803e-060
AT5G09670.2 loricrin-related4452e-044
AT5G09670.1 loricrin-related4452e-044
AT1G64140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 2298 Blast hits to 1429 proteins in 121 species: Archae - 0; Bacteria - 42; Metazoa - 1626; Fungi - 29; Plants - 243; Viruses - 9; Other Eukaryotes - 349 (source: NCBI BLink).2793e-025
AT4G12020.1 WRKY19; transcription factor2434e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members