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Information for unigene UN59751

FASTA Sequence
Unigene ID: UN59751Length: 797 SSR 
GGAAATCGAAATAGCCATTGTCATGTGTGTTGAGATCTCACTCCACACCATCTCATCATCAGATCTGAACTCTCTCCAGAAATTCT
CTAATCTGTATGTGTATTGAATTCAACTCAGCTCTCAATTCCAATACATCTCTCTCTCTCTCTCTCATGGCGCAGCAACAGTTCCT
TCACCAGCGCCCAATCAAAAACCCTTTCTCTTCATCTCCTCTTTCAAACTCCTCACTCTCTAACCGCCCAATCTCCCTCCTCAGCC
GCAACGGTCTCCTCCTCCTCCTCGCACTCCTCGTCATCCTCGGCGTGTTCCTACCCTGGGCTGGATCTCCCTTATTCCCATTCCCA
AACACATTCTCTTCCTCTTCCCACTCCAAATGGCGCGACTACTCCCTCGCGCAAGCCGTTAGTTTCGTCGCTAAGAACGGCACAGT
GATCGTCTGCGCAGTGAGCTATCCATACTTGCCTTTCCTCAACAACTGGTTGATCAGCGTCTCCAGGCAGAATCATCAAGACAAAG
TCCTCGTCATCGCCGAGGATTACGCTACTCTCTACAAGGTTAACGAGAAATGGCCTGGTCACGCCGTTCTCATCCCTCCCGCCCTC
GATTCTCAAACCGCTCACAAATTCGGTTCCCAGGGTTTCTTCAATTTCACATCAAGGAGCCGCAGCATCTGTTGCAAATTGTGGAG
CTAGGTTACAGTGTATGTACACGATGTTGATATGGTCTGGCTCCAGGATCCCTTCACTATTTGGAGAGACATGATGCTACTTCGAG
ATGACGTGACTGCTATAAGCCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872902 hypothetical protein ARALYDRAFT_912111 [Arabidopsis lyrata subsp. lyrata]8585e-090
NP_849279 rhamnogalacturonan II specific xylosyltransferase [Arabidopsis thaliana]8263e-086
NP_567211 rhamnogalacturonan II specific xylosyltransferase [Arabidopsis thaliana]8263e-086
AAB61018 A_IG002N01.8 gene product [Arabidopsis thaliana]8254e-086
AAK43874 unknown protein [Arabidopsis thaliana]8254e-086

Swiss-Prot top hits (Blast detail)Scoree value
P08640 Flocculation protein FLO111324e-007

TrEMBL top hits (Blast detail)Scoree value
Q5HZ43 At4g012208262e-086
Q9M146 At4g012208262e-086
Q94K03 Putative uncharacterized protein At4g012208252e-086
Q6DYB4 Putative uncharacterized protein6854e-070
Q9ZSJ2 1,3-alpha-D-xylosyltransferase6854e-070

Arabidopsis top hits (Blast detail)Scoree value
AT4G01220.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: RGXT1 (rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase (TAIR:AT4G01770.1); Has 188 Blast hits to 185 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).8261e-088
AT4G01220.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: RGXT1 (rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase (TAIR:AT4G01770.1); Has 153 Blast hits to 150 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).8261e-088
AT4G01770.1 RGXT1 (rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase6853e-072
AT4G01750.1 RGXT2 (rhamnogalacturonan xylosyltransferase 2); UDP-xylosyltransferase6843e-072
AT1G56550.1 UDP-xylosyltransferase6404e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members