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Information for unigene UN59800
| FASTA Sequence |
| Unigene ID: UN59800 | Length: 562 |
SSR | | GGGTTGCCGCCTCCGTCGTTATCCGTAACTCCGCCGTCAATGGAGATCCTCCTCTCATTCCGCTCCGTCGGAGCTCATCTCCTCCG
TCACGCCGCTCCGATCATAACCAGAGGCAACAGAACAACCAAACCCACCTCTAAAAATCTAACCTTTCTCTTATTCTCCTCCTCCT
CCTCTGCTAAAACCCCTCTTCTTAAACTCCCAGCTGCGTCGTCAGAGAAGGGCTCTTTCGTTTACAAAGGAGACGAGCGTGTGTTG
GGTCTTCAGAGCAGCAGCAAGGTCAGCAGAATAAACAAAATGTCTCAAGACGTAGAGAGTGCGTTAGATACAGCGAACTATGACAA
GCTTCTTCAAACCGGGTTGCAGGTAGCTATTATTGGGCGTCCTAACGTTGGGAAATCGAGTCTTTTAAATGCATGGAGCAAAAGTG
AGAGAGCCATTGTTACAGAAGTTGCTGGTACCACTCGTGACGTGGTGGAAGCTAGTGTTACCCTCCGTGGCGTGCCTGTCACTCTT
CTTGACACTGCTGGTATCAGAGAAACCAATGACATTGTCGAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889172 hypothetical protein ARALYDRAFT_895691 [Arabidopsis lyrata subsp. lyrata] | 431 | 8e-041 |
| AAF17686 F28K19.23 [Arabidopsis thaliana] | 429 | 1e-040 |
| NP_177924 putative tRNA modification GTPase [Arabidopsis thaliana] | 429 | 1e-040 |
| BAC98601 putative tRNA modification GTPase trmE [Oryza sativa Japonica Group] | 404 | 1e-037 |
| EEE68660 hypothetical protein OsJ_27256 [Oryza sativa Japonica Group] | 404 | 1e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8YN91 tRNA modification GTPase mnmE | 296 | 2e-026 |
| Q3MBM5 tRNA modification GTPase mnmE | 295 | 2e-026 |
| Q10VJ7 tRNA modification GTPase mnmE | 293 | 4e-026 |
| P0C8N9 tRNA modification GTPase mnmE | 292 | 5e-026 |
| P0C8P1 tRNA modification GTPase mnmE | 292 | 5e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q66GQ1 At1g78010 | 429 | 9e-041 |
| Q9SGZ9 F28K19.23 | 429 | 9e-041 |
| B9G0U3 Putative uncharacterized protein | 404 | 7e-038 |
| Q6Z9X4 Putative tRNA modification GTPase trmE | 404 | 7e-038 |
| B9RJF9 Gtpase mss1/trme, putative | 402 | 1e-037 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G78010.1 tRNA modification GTPase, putative | 429 | 7e-043 |
| AT3G12080.1 emb2738 (embryo defective 2738); GTP binding | 160 | 1e-011 |
| AT3G12080.2 emb2738 (embryo defective 2738); GTP binding | 160 | 1e-011 |
| AT5G39960.1 GTP-binding family protein | 147 | 4e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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