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Information for unigene UN59870

FASTA Sequence
Unigene ID: UN59870Length: 551 SSR 
GAGGAAGGTCCTCCTCCGGGATGGGAATCTATAGTTCTTCTTCCTCCTCCTCCTCCTCCGATCTCCGCCGTCACCACCGCCGCGAA
CTCCACCACCACCACCACCCCCGTCGAAATTCCCGAGAAGGCGCAAATGGTGTGTGGATCTTGCAGGCGTTTACTTTCGTATCCAC
GAGGAACCAAACACGTCAAGTGCTCTTGCTGTCTGACTCTTAATCTCGTTCTTGAAGCTTACCAGGTTGGTCAGGTGAAGTGCAGC
AATTGCGAATTGCTCCTGATGTATCCTTATGGAGCTCCATCGGTTAGATGTTCCTCCTGCAAATCTGTCACAGACATCAGAGAAGA
CAACAAACGACCTCCGTGGTCTGTGCAGCAAGGACCGCTCAAAACTTTCAGCAGTGCCCGATGACGAGACTAGACTTAAACCGTGT
TTCCTTTTTCCATATTTTGGATCGTTTTGATGACAAAACTGGTCAAAATGTTTGAAATTAGTATAATTTAGTGAACCAAATCATCT
TCAATAATCATATTGAGTTACCATTCTTTCAAATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193892 lsd one like 2 protein [Arabidopsis thaliana]5348e-053
XP_002869877 hypothetical protein ARALYDRAFT_492714 [Arabidopsis lyrata subsp. lyrata]5312e-052
XP_002273964 PREDICTED: hypothetical protein [Vitis vinifera]3691e-033
XP_002305138 predicted protein [Populus trichocarpa]3492e-031
XP_002519059 conserved hypothetical protein [Ricinus communis]3403e-030

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O65426 At4g216105346e-053
B9H2V4 Predicted protein3492e-031
B9RZ90 Putative uncharacterized protein3402e-030
B5TV67 Zinc finger protein LSD2-like protein3222e-028
A2WSJ7 Putative uncharacterized protein2854e-024

Arabidopsis top hits (Blast detail)Scoree value
AT4G21610.1 LOL2 (LSD ONE LIKE 2); transcription factor5345e-055
AT1G32540.2 LOL1 (LSD ONE LIKE 1); DNA binding2423e-021
AT1G32540.1 LOL1 (LSD ONE LIKE 1); DNA binding2423e-021
AT1G32540.3 LOL1 (LSD ONE LIKE 1); DNA binding2423e-021
AT4G20380.2 zinc finger protein (LSD1)1662e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members