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Information for unigene UN59888

FASTA Sequence
Unigene ID: UN59888Length: 702 SSR 
TCTCTCTCTCTCTCTCTCTCCCTCTCTCTAGTTCTGGATCGTATCAGTAAGAAGTTGTGAAAACTCAGATGATTACCTCTCTGACC
TGAAACCCTCTCTACTCAGCCAGATACAAAAAAAAGAGTGATTTTTGACGAACAGAGAGGCATACCTAATGGGCTCAGAGCAGCAT
AGGTTTCTTCAGCATCATGAACAGAGGAAAAGGTGGGAGGATGTTTAAGAGTCTTCTCTTGTTTCAAGTCACAAAAGGGCGGAAAA
CGAATTGTACCAGCGTCTCGCATTCCCGAAGGTGGTGGCAATGTCTCATCAGCCTCACAACCAAACCAACCTGGTGGTGTATTAAC
TAACCAAGCCACAGGAGGAGGAGGAGTTCATTTTGTCTTACTTAGCTCCACCGTCTTCTCCCGCCCTTCACAAACTCTGCCCTCCC
TTCCACCGCTCAGTCACCAAACAACTCCTACTTATCCCTAGCCGCCAACTCATCCCCTGTAGGAGGTCCTTCCTCTAGTATCTACG
CCACTGGACCCTACGCTCACGAGACTCAGCTTGTCTCACCTCCTCCTGTCTTCTCCACCTTCACCACCGAGCCGTCCACCGCTCCT
TTCACTCCTCCTTCGGAGCTCGCGTGCCATCTCACCACTCCTTCCTCCCCTGACGTCCCTTACGCTCGTTTCTTGACTTCTTCCTC
CGTGGATCTCAAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889094 hypothetical protein ARALYDRAFT_476825 [Arabidopsis lyrata subsp. lyrata]3754e-034
NP_177792 uncharacterized protein [Arabidopsis thaliana]3711e-033
XP_002300608 predicted protein [Populus trichocarpa]3567e-032
XP_002510760 conserved hypothetical protein [Ricinus communis]3559e-032
XP_002307833 predicted protein [Populus trichocarpa]3333e-029

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRE5 Uncharacterized protein At1g766603716e-035

TrEMBL top hits (Blast detail)Scoree value
B9GPK6 Predicted protein3565e-032
B9R8W7 Putative uncharacterized protein3556e-032
B9H5Z4 Predicted protein (Fragment)3332e-029
B6TU23 Putative uncharacterized protein3296e-029
C0PLY2 Putative uncharacterized protein3296e-029

Arabidopsis top hits (Blast detail)Scoree value
AT1G76660.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 280 Blast hits to 160 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 55; Fungi - 17; Plants - 64; Viruses - 4; Other Eukaryotes - 136 (source: NCBI BLink).3715e-036
AT5G52430.1 hydroxyproline-rich glycoprotein family protein2238e-019
AT1G63720.1 EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 406 Blast hits to 313 proteins in 78 species: Archae - 0; Bacteria - 2; Metazoa - 123; Fungi - 81; Plants - 111; Viruses - 14; Other Eukaryotes - 75 (source: NCBI BLink).2174e-018
AT4G25620.1 hydroxyproline-rich glycoprotein family protein2084e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members