RadishBase

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Information for unigene UN59902

FASTA Sequence

Unigene ID: UN59902	Length: 745	SSR
GGGCGAAACCCTAATCTTTGATTTCCGCTGCGTTCTTCCGAATCTCCGTCGGATCTCAAATTTGTCTTTCTCAGTGCTGAAATCTC CGAGAAGGTTTTGCTGCGAGGTGGACAACGGCTGGAAGGAGTCCCTCTCTCAAGGGATTGTCATCGTCGGCCCTAAAGCAAGAACC AGGGACAAACCTTGGGATCATCTTCTCTAATCTTTTCTACATGGCTCGGATCTTGGTTCAACGAGGAAGTTCTTCCAATGCTACCC GCTCTACTTCCTCCTCCTCCTCCTCCTCTGCCTCCTCTTCTGGTTCCTCTTCTGCCTCTGGAACAGAACCACCAGTGACTGTTTGT GAAGAAACTACGGATGAGGTTACTGTAGTTGAAGAAGAAGCAGGGTGTTCTGATGCTAAGGATGTATCACTCCACAGTGATGAACC TTTGGCTAAAGAAGATGATGAAGGTTTAGTTGTTTCGGAAAACGTTGTTGTTGTTGAAGGTGAAGGTGTAGATTGTGATTCTCCAG TTAGTGGTGGCGATGACCCTGATTCACCATCACCACCCGTGCCTGTTCCTCCACCGAAGCCTTCTTCTAATGTTACAACTGGTGGT AATAGGAGATCGATCTTGGGAAGTTTTGGTGATTTACAAATTGGAGCAACAACAAGAAGAGGAGCTGGGCCTCGCTCTCTTGTATC CACTAGGGTTCGCCAACTGGATCACGTCCTTCTTCTCCAGATCACAGAGTGAGACGA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_565648 OTU-like cysteine type protease [Arabidopsis thaliana]	449	1e-042
NP_973544 OTU-like cysteine type protease [Arabidopsis thaliana]	449	1e-042
XP_002880909 hypothetical protein ARALYDRAFT_481634 [Arabidopsis lyrata subsp. lyrata]	421	2e-039
XP_002862839 hypothetical protein ARALYDRAFT_359343 [Arabidopsis lyrata subsp. lyrata]	376	4e-034
XP_002040137 GM15514 [Drosophila sechellia]	136	2e-006

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q3EBS9 Putative uncharacterized protein At2g27350.3	449	9e-043
Q9XIP2 At2g27350	449	9e-043
B4I8S7 GM15514	136	2e-006

Arabidopsis top hits (Blast detail)	Score	e value
AT2G27350.1 OTU-like cysteine protease family protein	449	5e-045
AT2G27350.2 OTU-like cysteine protease family protein	449	5e-045
AT2G27350.5 OTU-like cysteine protease family protein	449	5e-045
AT2G27350.3 OTU-like cysteine protease family protein	449	5e-045
AT2G27350.4 OTU-like cysteine protease family protein	449	5e-045

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	1			100%

Unigene Members