 |
Information for unigene UN60157
| FASTA Sequence |
| Unigene ID: UN60157 | Length: 796 |
SSR | | AATCAATTTTTTATAATCAAGAAACTTGTTAACAATCTCAAAACACAATGCAAACCCAATCTTTTAAAATTACAAACTGTTGGAAG
TGAGAGAGAGAGAAGCATTAGAGAAGTGGATACAAACTGAAACAAATAAATAAAATAGCAATAGTGATCATCCCAACAAAACAAGG
CTAAAACAACACATACTTAATCTAGCATATGTTCCAATACAGAGAACCTCCTTATCATTGTGATGGTGAGGAGACTGTGCATCATA
ACTACTTCTTTTTAAGCCCTGATCTCTCGACCAAATATCCAGCTGAAAGGTATGTCTCTTGCAGTGTCTTTGCCTCTCCCTTGAGC
CCTCTCTTCCAGTTTGCGGATCCTAGCTGGCAATTTACAGAGATAGTCCTGGGCCTTGTGTCCATCACCAGAGAGACCAGCCAAGT
TCTCCACGTTCCACCGCCTCACAAGAAACTCCAGTATATCAGCATAGTCCCTAGCAGTGTAGACACCAAGCCTCTGCGCCACGGAG
GAGAAGTGCTCAAACAGATTGTCATCAGAGCCATCGTACATCAAATGAGCAGGCATGGCTATCTTTTTCCTCATCATGTCAGCAAA
GCCTACAACAGTGGTGTCAGGATCGATCTCGAAAAGCTTCTCCACAATCTTGGTGTAAGCAGTCTCGTGACGCTTCTCATCAGCAG
CGATGGTGTCGCAGATCTGCGCTAGCTTCGAGTCCCCAAGCTTCTTTGCGAGTCCAGCAGTGTTTCCATGAGAGATGAGGTAGCTC
TCTCTTGAAAGAAGTGTAGATG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871710 hypothetical protein ARALYDRAFT_909604 [Arabidopsis lyrata subsp. lyrata] | 730 | 4e-075 |
| XP_002882244 hypothetical protein ARALYDRAFT_477504 [Arabidopsis lyrata subsp. lyrata] | 716 | 2e-073 |
| AAM64846 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 708 | 1e-072 |
| AAM20635 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 708 | 1e-072 |
| NP_186912 acyl-[acyl-carrier-protein] desaturase [Arabidopsis thaliana] | 708 | 1e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 667 | 3e-069 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 665 | 6e-069 |
| Q43593 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 659 | 3e-068 |
| P22243 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 657 | 5e-068 |
| Q41319 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 655 | 8e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L468 Putative stearoyl-acyl carrier protein desaturase | 708 | 9e-073 |
| Q8LBC6 Putative stearoyl-acyl carrier protein desaturase | 708 | 9e-073 |
| Q9M879 Putative stearoyl-acyl carrier protein desaturase | 708 | 9e-073 |
| Q8LA10 Stearoyl-acyl carrier protein desaturase | 707 | 1e-072 |
| Q9LF04 AT5g16240/T21H19_160 | 707 | 1e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 709 | 4e-075 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 708 | 6e-075 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 635 | 2e-066 |
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 635 | 2e-066 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 586 | 8e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
