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Information for unigene UN60283

FASTA Sequence
Unigene ID: UN60283Length: 733 SSR 
AGAAGAAACAAATTACTTTCTTTTTATTGATTACTTTTATAAAAAAAACTGTTCCATGTGTATAAGATTTGGCAGAAACAGCTTAT
TACAGTTCTAAAAACTAATCCTGAATCATTTGAACTTCAATCTATGTATTAGTAGTAGTTCGACTCTGACTTGTTGTTGTTGAAGT
TCCTTGGCGCTCACGTTTTCTTCCACCGTTAGCAAACCTCTTCCCAAACCCTAAAAGAACAGGAGGAACAAGACCCCCTCCTCCAC
CGGTCAAAGCGCAAACAACCGCAACAGCTCCACCGATAAACAACAGTTTCTTCAAATTCGCAGCTACGTTTCCTCCGTTGTGTGTA
GTAATGGGAGTTTCAGTGACAGGCGACGCGCCGTTGCTGAGAGAGATGAGATGTTCTGATGTCACCTTGGTGTTGATCTGAGCCAT
TAAAGCTGGCCGAGAAAGCTTGGATCCTCCTCCTCCTCCTCCTCTTAAGAGTCTTTGCTCTTGGTAAGCACGTAAACCAGGTTCCA
TCTTCTTAACCGCTCCCCACATCCCTCGTTTCACACCGAGCTTTGCGATCTCTCTTGGTATCCCCATGTCTTCGTGGTGAAACAGA
AGCACTTCGCAGGCACTTGCCACTCCATCCTCTCTTCTTGATTCCACTGGTCGAATGCACCAGCTCGAGTAGAACAAGTCCACACG
TTTCTGTTTGTTGTTGCGTGGTACACAAGGAACCGACACTCCCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB11579 membrane related protein-like [Arabidopsis thaliana]7502e-077
NP_568805 Lipid-binding START domain-containing protein [Arabidopsis thaliana]7502e-077
XP_002866025 hypothetical protein ARALYDRAFT_918536 [Arabidopsis lyrata subsp. lyrata]7502e-077
AAM65221 membrane related protein-like [Arabidopsis thaliana]7412e-076
XP_002278777 PREDICTED: hypothetical protein [Vitis vinifera]4543e-043

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FK24 Membrane related protein-like7501e-077
Q8LAQ0 Membrane related protein-like7411e-076
B9RYW5 Phosphatidylcholine transfer protein, putative4533e-043
B9I0R9 Predicted protein4524e-043
B9IDH8 Predicted protein4524e-043

Arabidopsis top hits (Blast detail)Scoree value
AT5G54170.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: CP5 (TAIR:AT1G64720.1); Has 233 Blast hits to 233 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).7596e-081
AT1G64720.1 CP54352e-043
AT4G14500.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23080.1); Has 257 Blast hits to 256 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).3115e-029
AT3G23080.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14500.1); Has 247 Blast hits to 246 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 162; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).2982e-027
AT3G23080.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14500.1); Has 247 Blast hits to 246 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 162; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).2982e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members