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Information for unigene UN60349
| FASTA Sequence |
| Unigene ID: UN60349 | Length: 670 |
SSR | | GAGACGAATGTTCAGTCCAGGAGTGATTCCGTTAGAGCAGAACCTCTCAAACCTTCTAAGACTAGTCTTGCTCTACAAGTTCGGCG
GTATCTACTTAGACACAGATGTTATAATCCTCAAACCCCTCACGAATCTCCACAACGTGATCGGTGCACAAACAGTTGATCCAGTT
ACAAGAAGATGGAGCGGGCTCAACAACGCGGTGCTCATCTTCGACAAGAACCATCCATTGCTTAAAAGCTTCATCGACGAGTTCTC
AAGAACCTTCAACGGTAACAAATGGGGTCACAACGGTCCATACTTAGTGTCAAGAGTGGTCGCAAGATTCAACGTTTCTTCCTCTT
CCTCGGATTTGGGATTCTCTGTTCTTCCACCGTCTGCGTTTTATCCGGTGGATTGGACTAGGATCAGTGGATTTTACAGACCGTCT
GTGAATGAGAGAGAAACAGATTGGTCAGGGAAGAGACTTATGCATTTACGTAAACATAGCTTAGCTGTTCATCTTTGGAACAGAGA
GAGTAAGAAGCTTAGGATTGAAGAAGGAAGCATCATTCAACAACTCATGTCTGATTCTTGTATCTTCTGTAACTTTTCATTTTTAC
ATTAGTTAAAAAAAACATGTAAAGTAAATTACCTAAAAGAGAGAGAGAGATAGAGACAAAAGACAAAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002888110 alpha 1,4-glycosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | 887 | 2e-093 |
| NP_176300 alpha 1,4-glycosyltransferase-like protein [Arabidopsis thaliana] | 859 | 3e-090 |
| XP_002316629 predicted protein [Populus trichocarpa] | 636 | 2e-064 |
| XP_002268121 PREDICTED: hypothetical protein [Vitis vinifera] | 635 | 3e-064 |
| CBI38494 unnamed protein product [Vitis vinifera] | 635 | 3e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q67BJ4 Lactosylceramide 4-alpha-galactosyltransferase | 286 | 4e-025 |
| Q9JI93 Lactosylceramide 4-alpha-galactosyltransferase | 285 | 5e-025 |
| Q9N291 Lactosylceramide 4-alpha-galactosyltransferase | 282 | 1e-024 |
| Q9N289 Lactosylceramide 4-alpha-galactosyltransferase (Fragment) | 280 | 2e-024 |
| Q9NPC4 Lactosylceramide 4-alpha-galactosyltransferase | 279 | 2e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C949 Putative uncharacterized protein T7P1.18 | 859 | 2e-090 |
| B9HYL1 Predicted protein | 636 | 1e-064 |
| B9H266 Predicted protein | 626 | 2e-063 |
| B9RZ58 Lactosylceramide 4-alpha-galactosyltransferase, putative | 624 | 4e-063 |
| Q2HUE1 Glycosyltransferase sugar-binding region containing DXD motif; Alpha 1,4-glycosyltransferase conserved region | 608 | 3e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G61050.1 alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein | 859 | 1e-092 |
| AT5G01250.1 alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein | 556 | 2e-057 |
| AT3G09020.1 alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein | 539 | 2e-055 |
| AT2G38150.1 transferase/ transferase, transferring glycosyl groups | 527 | 4e-054 |
| AT2G38152.1 galactosyltransferase | 494 | 3e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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