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Information for unigene UN60375
| FASTA Sequence |
| Unigene ID: UN60375 | Length: 568 |
SSR | | GAAGATGAAAACCAAGAGAAAGAAGAGAAGCAGCCATCACGTGAGAAAGAACGAGCGACCACGGAACGTGACTGGTCTGAGAGCAG
TGGTGGTGATAGAAGACACAAGAGTCACCGCGAAGAGAAAGATAGTCACCGCGAGTATAGGCACCGTGATTCTGAAGAGTACGATA
GAGGACAATCTTCTTCCAAGTCTCGAAGCAGGTCAAGAATGTCGGAAGATGATCATAGGTCCAGGTCAAGAGATGCAGACTACGGA
AAGAGAAGGCGTGGAGACTGAAACAGAACATCTCATGTTCTTCGTGCCTCTTCTCTCTTGTTTGATGCATCTAAACAAATACCGGT
TTAAAGTTACTCTGCATACTACTTATCATCCAATATTTGATACAATGTTTCTCTTACCTTGTTTGCTGATGATTGTCTTTGGAGAC
GAGCATATATATATATGTGTAAACTGTGTTTTTGTTGAAGTTTCATTTGTTATTACAAACACCATGATTTAGGGAGTTGTTGTGAC
TCATTGTAGCCTATTTACGATGAAAAGAGATCTTTTATTCATTGCTTTTATT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_172778 RNA recognition motif-containing protein [Arabidopsis thaliana] | 405 | 8e-038 |
| XP_002889992 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] | 405 | 8e-038 |
| XP_002265353 PREDICTED: similar to RNA recognition motif (RRM)-containing protein [Vitis vinifera] | 170 | 1e-010 |
| XP_002522751 RNA-binding protein, putative [Ricinus communis] | 156 | 6e-009 |
| CBI39731 unnamed protein product [Vitis vinifera] | 154 | 1e-008 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q5VTL8 Pre-mRNA-splicing factor 38B | 137 | 5e-008 |
| Q2R0Q1 Splicing factor U2af large subunit A | 132 | 2e-007 |
| Q8CGZ0 Calcium homeostasis endoplasmic reticulum protein | 131 | 3e-007 |
| Q6P7Y3 Pre-mRNA-splicing factor 38B | 118 | 8e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9SAF2 F3F19.21 protein | 405 | 6e-038 |
| B9S9T2 RNA-binding protein, putative | 156 | 4e-009 |
| Q0WTD1 Putative uncharacterized protein At5g55670 (Fragment) | 154 | 7e-009 |
| Q9FM71 Genomic DNA, chromosome 5, P1 clone:MDF20 | 154 | 7e-009 |
| B8BLH5 Putative uncharacterized protein | 133 | 2e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G13190.1 RNA recognition motif (RRM)-containing protein | 406 | 3e-040 |
| AT5G55670.1 RNA recognition motif (RRM)-containing protein | 154 | 6e-011 |
| AT5G23080.1 TGH (TOUGH); RNA binding / protein binding | 118 | 8e-007 |
| AT5G23080.2 TGH (TOUGH); RNA binding / protein binding | 118 | 8e-007 |
| AT3G03340.1 UNE6 (unfertilized embryo sac 6) | 116 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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