Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN60472

FASTA Sequence
Unigene ID: UN60472Length: 773 SSR 
GGACATAACTCCATCTCTGTGCAATCAATCCTTCTGAAATCTCATTTATTTTTAGCGATTAAAGAGAGAGAGAGATTCCGATCAAA
ACAAGTAAACGAAAAATCTAATCACCGTTTGAGTTCTTTCTCTCTTCTCTGGGGTTCTTCTTCTTCTACAAGCTTCATCCACTAAA
CATGAGTCGTCATCCTGGAGTTAAATGGGCAGAGACCACTGACAAGATTTTCCTCACCGTAGTGTGGCTGATTCCAAGGAGACATA
AGTTAATCTTCTCACTGAAGTTGTCTTCGATTTCTCTGCAAAAGCTGGTCCTGAAAATCACGTTTATGAGCTTAAACTCGAGCTTC
ACAACAAAGTCAATGTTGAGGAGAGCAAAATCAACATTGGATTGAGAAGCATATTCTGCATAATTGAGAAAATAGAGCCTGAAACG
TGGGACAAACTAATCCTTCGAAAGGGCCACACTATGTCAAGATTGATTGGGAGGCTGTACTGCTTACAATCAAGGGACCGGACGAG
GAACGTCTGTATTAGAAATGGTTGCTGCTTTTAAAAAAAGCTTCTGGCAAGAAAATAGCTATCAAGCTTTGTCCGAGAAGACCAGG
AGATGCAACTGCAGTTTATACTTCAACAGAGAGAGCTGAGAAAGAACTTGGCTGCAAGATAAAAGAGAGAAAGAGCAACAACTTCT
ATGTATATCCAAAGAGATGATTATGCTGTACATCACAAGACCTACTACTCCTAATGCTGGCGATGCCTTACGTTCACGTAGATCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872836 predicted protein [Arabidopsis lyrata subsp. lyrata]2797e-023
CAC16575 p23 co-chaperone [Arabidopsis thaliana]2743e-022
AAC19287 T14P8.5 [Arabidopsis thaliana]2743e-022
NP_192154 HSP20-like chaperone [Arabidopsis thaliana]2743e-022
NP_001154201 HSP20-like chaperone [Arabidopsis thaliana]2743e-022

Swiss-Prot top hits (Blast detail)Scoree value
P0C8Z0 Uncharacterized protein OsI_0279402158e-017
Q6YYB0 Uncharacterized protein Os08g03595002158e-017
O65780 UDP-glucose 4-epimerase GEPI421655e-011
Q42605 UDP-glucose 4-epimerase 11593e-010
Q43070 UDP-glucose 4-epimerase1593e-010

TrEMBL top hits (Blast detail)Scoree value
O81288 Putative uncharacterized protein AT4g024502742e-022
Q8L7U4 AT4g02450/T14P8_52742e-022
Q9FT78 P23 co-chaperone2742e-022
C6TIY1 Putative uncharacterized protein2142e-015
C6SXA1 Putative uncharacterized protein2042e-014

Arabidopsis top hits (Blast detail)Scoree value
AT4G02450.1 glycine-rich protein2741e-024
AT4G02450.2 glycine-rich protein2741e-024
AT1G12780.1 UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1); UDP-glucose 4-epimerase/ protein dimerization1592e-011
AT1G63180.1 UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3); UDP-glucose 4-epimerase/ protein dimerization1565e-011
AT4G10960.1 UGE5 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5); UDP-glucose 4-epimerase/ protein dimerization1208e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members