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Information for unigene UN60521
| FASTA Sequence |
| Unigene ID: UN60521 | Length: 585 |
SSR | | GGATTGACGCTTCTTCTTCTCCATCGACGCCGCTCTCTTCTCTTCTCCTTTGAGCTTTCTCTTCTTCAAGCTTCGTCTCGTCTCTC
ACACCATCTCCAGAGCTCTCTCTCTCTCGATCTCAAACCCAGGCTCTCCACATCTCGACCCTCTCTCCATCAAGCTTCGTGCATCT
CCTTCAAGTGCTCTGCTTGTCGCTGCTTCAGTTATATGGTGTCTAAGAAGAAGTACATCTTCACTATTGACGACGATTGCTTGCTC
TCTCAGGCTTCTCCATAGCATCTCCGGCTCTGTCTGTGTGTCTCAAGCTCTCCTAAGCTTTGTCTGTCTTTCACTCTCTCGCTCAC
AAGTACTTGCGGCAAAGAAGTGTGTTCTGTGCTTTGTCTCAAGGTCTCCAAAACTTTGTCGCTCACTCTATTGTAAGAGCTTTTCC
TTTTATGCTTGTTTTTTGTTTAGTAAGTTGTGGTTGCTTCTTGTTTAGTTCTGGTTTTCATCTTAAAGCACTTTAATTTTGTTGAA
TAAGAGTTTGTTTTCACAAGTTTTAAACTTTGTTCTAAAGAAATTTGAAAAGAGTACATGGCCTCTTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM65020 reversibly glycosylated polypeptide-3 [Arabidopsis thaliana] | 172 | 9e-011 |
| AAC50001 reversibly glycosylated polypeptide-2 [Arabidopsis thaliana] | 166 | 5e-010 |
| NP_197069 reversibly glycosylated polypeptide 2 [Arabidopsis thaliana] | 166 | 5e-010 |
| XP_002871677 reversibly glycosylated polypeptide-3 [Arabidopsis lyrata subsp. lyrata] | 166 | 5e-010 |
| ABD96890 hypothetical protein [Cleome spinosa] | 163 | 1e-009 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SC19 Alpha-1,4-glucan-protein synthase [UDP-forming] 1 | 159 | 2e-010 |
| Q8RU27 Alpha-1,4-glucan-protein synthase [UDP-forming] 2 | 159 | 2e-010 |
| P80607 Alpha-1,4-glucan-protein synthase [UDP-forming] | 159 | 2e-010 |
| O04300 Alpha-1,4-glucan-protein synthase [UDP-forming] | 159 | 2e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LB19 Reversibly glycosylated polypeptide-3 | 172 | 7e-011 |
| O22428 Reversibly glycosylated polypeptide-2 | 166 | 3e-010 |
| Q9LFW1 AT5g15650/F14F8_30 | 166 | 3e-010 |
| Q1KUU6 Putative uncharacterized protein | 163 | 7e-010 |
| Q1KV01 Putative uncharacterized protein | 163 | 7e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G15650.1 RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups | 166 | 2e-012 |
| AT3G02230.1 RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1); cellulose synthase (UDP-forming) | 162 | 7e-012 |
| AT3G08900.1 RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); transferase, transferring hexosyl groups | 159 | 2e-011 |
| AT5G50750.1 RGP4 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 4); transferase, transferring hexosyl groups | 144 | 8e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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