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Information for unigene UN60522
| FASTA Sequence |
| Unigene ID: UN60522 | Length: 808 |
SSR | | GGAATAAACGAAGAAGAAGGAAGAAGTAGAAGAACCGCTGTTTCTCTCTCTCTAACCTGTCTGAAATAACTCACTCGCTGACAAAA
ACTTCATTATCTCGCCGGAAACGTCCTCTTCACTCCATTTATCAAATATATATCTTTCTTTGACTCACAAACCATTTTCTCAATCC
TTTTCGTTTTCTCTTTCTTTGACTATTCTCCCTTTTTTCTCTCTCTCTCTCTCTTATACTATTATTCAAAGATGCTCTCATGAAAA
TTGATTCCAGTCAGTGAATCTTCTTTCTCCTAATTCGTCATGAGTGACTCCACAAACAGCGTCTCTCCTTCCTCCGATTACGCCTC
CATCTCCTCCGGCGACCAGTCTCTTCAGAGGAGTAGTAGAAGGAGTGGAGATGGAAACCGAGCCATCGTCCGCGAGTCCCGTCACT
GGCACGACGTCTTCTGGTCAGCCATCCTCGTGATCCACCTCATATGCTTAGGCTTCGTGCTCGCGGTCCTTGGACTCAACAGGTTT
AGGATATCGGATAGGCTAAACATCGATAGATACACCCAAGGCTTCTTGGAGAATCACAAAGGACTCACCGAAGACTACTGGCCACT
CTACGCCGTCGCCGGTGGCATTGGTGTCTTCATCAGCTGGGTCTGGTCGTTCTTCTCGGCTCTTACGCCAACGAGATGATGAAAGT
CTCTGTCCACATCTTGACCACGTACTTGGCTGTGGTCAGCGTGCTGTGTTTCTGGTGCAGACAGTTCTTTTGGGGCGGGGCTTTCG
CTATCGGAGCTCTGCTGCAGTTCTTGTATGTTGT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_173921 plasma-membrane choline transporter-like protein [Arabidopsis thaliana] | 602 | 3e-060 |
| NP_849707 plasma-membrane choline transporter-like protein [Arabidopsis thaliana] | 602 | 3e-060 |
| XP_002890687 hypothetical protein ARALYDRAFT_313379 [Arabidopsis lyrata subsp. lyrata] | 596 | 1e-059 |
| XP_002282011 PREDICTED: hypothetical protein [Vitis vinifera] | 359 | 4e-032 |
| XP_002529146 Protein PNS1, putative [Ricinus communis] | 312 | 1e-026 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3ED59 Putative uncharacterized protein At1g25500.1 | 602 | 2e-060 |
| Q9C6L9 Putative uncharacterized protein F2J7.7 | 602 | 2e-060 |
| B9ST27 Protein PNS1, putative | 312 | 8e-027 |
| B9HJ05 Predicted protein (Fragment) | 284 | 1e-023 |
| B9HWK8 Predicted protein (Fragment) | 267 | 1e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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