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Information for unigene UN60560
| FASTA Sequence |
| Unigene ID: UN60560 | Length: 718 |
SSR | | GTCCCCGATCGGCGAGCGCTCTCAGCCTCTGGAAAATTCGACCTAACTCACGCGCGCCTCAACGATCTAATCGAACGCGCCGCTTC
ACGCCTCGTCTCCTCCGCCGTAATCAAACCAGGCGATGTCGTGGCTCTCACTTTCCCCAACACCGTCGAGTTTGTGATTATGTTTC
TGGCGGTGATAAGAGCTCGAGCCACGGCGGCGCCGTTGAACGCGGCCTACACGGCGGAGGAATTCGAGTTTTACCTCTCGGATTCA
GATTCGAAGCTGTTACTAACCTCCAAAGAAGGCAACGCGCCGGCTCAAGAAGCAGCTTCGAAGCTCAGCATCTCTCACGCCACCGC
CACGCTCCTCGACGCCGGCTCGGATCTCTCTCTCTCCGTCGCCGATCCCGACTCGGTCGCCGACTCAACAGCTTCCGAGCTCGTCA
ACAGCCCCGACGATCCGGCTCTCTTCCTCCACACTTCCGGCACCACGAGCCGTCCCAAGGGCGTACCCCTCACGCAGCTGAATCTT
GTTTCATCCGTCAAGAACATTAAATCGGTTTACAAGCTCACCGAGTCTGATTCGACTGTGATTGTTCTCTCTCTGTTCCACGTGCA
TGGACTGTTAGCTGGGCTGCTCAGCTCGCTTGGAGCTGGCGCGGCTGTGACTCTCCCAGTTGCTGGTAGATCTCTGCGACGACGTT
TTGGGCAGACATGAGAGTATACGCCCGTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877640 AMP-dependent synthetase and ligase family protein [Arabidopsis lyrata subsp. lyrata] | 982 | 2e-104 |
| NP_190468 AMP-dependent synthetase and ligase-like protein [Arabidopsis thaliana] | 979 | 4e-104 |
| AAM65672 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] | 965 | 2e-102 |
| XP_002322473 acyl:coa ligase [Populus trichocarpa] | 841 | 4e-088 |
| CBI22725 unnamed protein product [Vitis vinifera] | 805 | 6e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O74976 Putative peroxisomal-coenzyme A synthetase | 359 | 1e-033 |
| P38137 Peroxisomal-coenzyme A synthetase | 195 | 2e-014 |
| Q6GLK6 Acyl-CoA synthetase family member 3, mitochondrial | 181 | 7e-013 |
| A6TDH2 Bifunctional protein aas | 146 | 7e-009 |
| Q6D107 Bifunctional protein aas | 145 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SMT7 4-coumarate-CoA ligase-like protein | 979 | 3e-104 |
| Q8L9Z5 4-coumarate-CoA ligase-like protein | 965 | 1e-102 |
| B9ID90 Acyl:coa ligase | 841 | 3e-088 |
| B9R9A8 AMP dependent CoA ligase, putative | 800 | 2e-083 |
| Q946Z2 Putative acyl-CoA synthetase | 789 | 3e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G48990.1 AMP-dependent synthetase and ligase family protein | 979 | 2e-106 |
| AT3G21230.1 4CL5 (4-coumarate:CoA ligase 5); 4-coumarate-CoA ligase | 184 | 3e-014 |
| AT3G16170.1 acyl-activating enzyme 13 (AAE13) | 176 | 2e-013 |
| AT4G19010.1 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | 173 | 5e-013 |
| AT5G38120.1 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | 172 | 7e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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