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Information for unigene UN60563
| FASTA Sequence |
| Unigene ID: UN60563 | Length: 720 |
SSR | | GGAGAGAGAGAGAGCCTCTGCATCTCGTGTTTGCTCCGCCGTCAGGGGAAAAGAATATGGAAGCTGTTCAGAGGTTTCACTACTCC
GCACCATGTATTGATTGGAGAAATTTTGAAGGGAAACCTCGTGGTTCTCTACGTTACTCTCAGCGAGTCAAAGAGAATAAATGGCT
TATAGCTCATTTGAAACCTGACAAAAGAAGGGATCTTCGACAAAGATCAGTTTCGGACAAGAACTCCTCAGGAATGATGGGTTCCG
GGAAGACGACAGTAGGAAAGATCATGGCAAGAGCACTTGGTTATTCCTTCTTTGATTGTGACACATTGATCGAGGTGGCGATGAAT
GGAACTTCTGTAACTGAGATATTTGAGCATTTCGGTGAGAGTGTCTTCAGAGAGAAAGAGACGGAGGCACTAAAGAAGCTCTCTCT
GATGTACCACCAAGTTGTTGTGTCAACTGGTGGAGGTGCTGTTATAGGACCCATTAATTGGAAGTACATGCATAAAGGTATTAGCA
TTTGGCTTGATGTTCCCTTAGAAGCCTTAGCGCAAAGAATTGCTGCTGTGGGAACTAATTCAAGACCATTGTTACATGATGATCAG
TCAGGAGGAGACCCATACACAGTGGCTTTAAACCGTCTTTCACTATATGGGAAGCACGTGGTGAAGCATACACAAACGCCAGCGCG
AGAGTCTCTTTGGAGATATCACGTCAAAGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001190969 shikimate kinase 2 [Arabidopsis thaliana] | 629 | 2e-063 |
| NP_195664 shikimate kinase 2 [Arabidopsis thaliana] | 624 | 6e-063 |
| 3NWJ Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis Thaliana (Atsk2) | 624 | 6e-063 |
| XP_002866854 shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata] | 621 | 1e-062 |
| AAD20411 putative shikimate kinase precursor [Arabidopsis thaliana] | 537 | 7e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SJ05 Shikimate kinase, chloroplastic | 537 | 3e-054 |
| Q00497 Shikimate kinase, chloroplastic | 458 | 5e-045 |
| Q31PU5 Shikimate kinase | 289 | 2e-025 |
| Q5N4D3 Shikimate kinase | 289 | 2e-025 |
| A5GQN5 Shikimate kinase | 289 | 2e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GY88 At4g39540 | 624 | 4e-063 |
| A8MRG1 Uncharacterized protein At2g21940.3 | 537 | 5e-053 |
| Q9SVA4 Shikimate kinase-like protein | 509 | 9e-050 |
| C6THS3 Putative uncharacterized protein | 491 | 1e-047 |
| A5AZY1 Putative uncharacterized protein | 474 | 1e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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