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Information for unigene UN60713

FASTA Sequence
Unigene ID: UN60713Length: 751 SSR 
GGAAAGGCAGAACCTTTGAATGGTGATATTGAGATTTGATTGATCGTGATTTAAGTAAACGCTTCAGAGATCGTTTGTTGGTTGAT
AATGATGGAAGTGGAGAAGCTGAAGGAGGCTTTGCGTTTTATCCGCTCTTCTGATTTCCTGAGGATGGCTCTGTTTTGGAACTTGG
CCCTCCTTTCTTCTTACTTTCAGTTGCTTAAAAGAAGGATCTTTGGCTCAAAACCAACTTCCTTTTCTTCTTCTTCTTCTTCACAC
AGACCTATTTGTGTTATCACAGGTGTAAGTCATTTTGTCTTGCTTCTTCTAGCAGTGTGATGGTAATGTATTGACTGCATTAAACT
TCATTTGTCTTACTTCATTTTTGCAGGCTACTTCAGGGCTTGGTAAGGCAACTGCGTTTGCTCTTTCAAGGAAAGGCTTCTACATA
GTTCTTGTTGGACGGTCCTCTCACTTACTATCAAAGACGTTGGCTGAAATCAGGAAGCAGAACAAAGATGCTCAACTCAAAGCTTT
TGAAGTTGACATTTCTTCTTTTCAATCGGTTTCCAAGTTCAGAAACTCACTAGAGCAGTGGCTTCTAGACTCAGATTTACATTCTT
CCATCCAGCTTTTGGTTAACAACGCTGGAATACTTGCAACTTCAAGTCGTCCAACCATTGAAGGCTTTGACAGGATGATGGCTACT
AACTACATTGGTGCATTCTCTTTGACAAAACTTCTCTTACCGCTTCTGAGAAACAGCCCTGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871074 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]5744e-057
NP_196027 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]5654e-056
XP_002871693 predicted protein [Arabidopsis lyrata subsp. lyrata]5181e-050
CAC01793 putative protein [Arabidopsis thaliana]4983e-048
NP_197098 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]4983e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q8VBZ0 Dehydrogenase/reductase SDR family member on chromosome X homolog1825e-013
O74959 Uncharacterized oxidoreductase C736.131682e-011
Q8N5I4 Dehydrogenase/reductase SDR family member on chromosome X1655e-011
Q8NBN7 Retinol dehydrogenase 131583e-010
Q8BYK4 Retinol dehydrogenase 121574e-010

TrEMBL top hits (Blast detail)Scoree value
Q6NLR7 At5g040705653e-056
Q9LFS7 Putative uncharacterized protein F1N13_804982e-048
B9RAK5 Short-chain dehydrogenase, putative4972e-048
B9GJJ0 Predicted protein4651e-044
C6TA97 Putative uncharacterized protein (Fragment)4301e-040

Arabidopsis top hits (Blast detail)Scoree value
AT5G04070.1 short-chain dehydrogenase/reductase (SDR) family protein5652e-058
AT5G15940.1 binding / catalytic/ oxidoreductase4981e-050
AT5G02540.1 short-chain dehydrogenase/reductase (SDR) family protein1871e-014
AT4G23430.1 short-chain dehydrogenase/reductase (SDR) family protein1852e-014
AT4G23430.2 short-chain dehydrogenase/reductase (SDR) family protein1852e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members