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Information for unigene UN60819

FASTA Sequence
Unigene ID: UN60819Length: 701 SSR 
GGACAATTCACCCAATCATATCCTCTTACTGTGCTGTAAGAGAACGAACTCTCCCCCCTCTCTCTCTCTCCGACCTAGATTCCCTC
CTCTCAATTGTCAGAAAAAAAATGGCTGGTGCTAAGAAGCTCTCATCATCAGCCAAGACTAAACCTTCGAGTGTCTCTGGGAAAGA
TAAGGTTAGCAATGGTGAAGACTTGGTGGGTTCAAAGGTTAGAGTTTGGTGGCCGATAGATCGAAAGTTCTACAATGGAGTGGTTG
ATTCCTTTAACTCTCGCACTAAGAAACATCGGGTTTTTTATGATGATGGTGAGAAAGAGATCTTGGATATGGACAAGGAGAGGTGG
GAGTTAATTGAAGATGATGATGGTGATGAATCCAAGCCGCTGCAGATTTTGGTGGATAAGTTGAAGGGCAAGAAGAAGAAGCAGGA
GAAGGAATCCCCCAAAGAGGAGACCAAAGAGGGTGAAGAACCCAAGGAAGAAGGGGAAGAGGGTGAAGAACCCAAGGAAGAAGGGG
AAGAAGGTGAAGAACCCAAGGAAGAAGAGGAAGAGGGTGAACAGGCTTAGACAAGAGAGTTTCTCAGTCTATCTCAATGTGCAAGT
ATTTTAGAAGAGTTTTTAATTTATACAGCTGAGTCTTACTTGGTTAAAGTATAGGACTTGTAGGGATTTTTAGTTATGTTGATTCG
AAAATGTGCAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873488 hypothetical protein ARALYDRAFT_909052 [Arabidopsis lyrata subsp. lyrata]3154e-027
NP_196656 cylicin-related protein [Arabidopsis thaliana]3055e-026
NP_001174723 Os06g0286351 [Oryza sativa Japonica Group]2482e-019
XP_002282819 PREDICTED: hypothetical protein [Vitis vinifera]2455e-019
CBI21072 unnamed protein product [Vitis vinifera]2455e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q8CFC2 Myelin transcription factor 11467e-009
Q54F38 Histone H3.v11395e-008
Q9EPQ2 X-linked retinitis pigmentosa GTPase regulator-interacting protein 11378e-008
P13816 Glutamic acid-rich protein1342e-007
P23255 Transcription initiation factor TFIID subunit 21323e-007

TrEMBL top hits (Blast detail)Scoree value
Q9LEU5 Putative uncharacterized protein At5g109503054e-026
Q5VMT5 Os06g0286351 protein2482e-019
B3H4B3 Uncharacterized protein At1g80810.12428e-019
A8MRD9 Uncharacterized protein At1g80810.22411e-018
Q9SAI0 F23A5.16 protein2392e-018

Arabidopsis top hits (Blast detail)Scoree value
AT5G10950.1 cylicin-related3052e-028
AT1G80810.1 binding2425e-021
AT1G80810.2 binding2416e-021
AT4G31880.1 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: binding (TAIR:AT1G15940.1); Has 114836 Blast hits to 56273 proteins in 1914 species: Archae - 187; Bacteria - 15478; Metazoa - 53116; Fungi - 16017; Plants - 4342; Viruses - 719; Other Eukaryotes - 24977 (source: NCBI BLink).2292e-019
AT5G47690.1 binding2157e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members