RadishBase

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Information for unigene UN61218

FASTA Sequence

Unigene ID: UN61218	Length: 671	SSR
ATCCGAATCTATGTTAAAAATCGCATCTTTATCCTGTTGAGATATAGTCAGTAGTAGTAGTAGTTGGTGACGCATACACACAGAGA TGGGATCCGCCGCTGCAGCCACTTCTTCTTCTTCTTCTTCTTCTGATGTTGCAATCTCAGCTCTGCGTGAGAAGCATGAGAAGGAA GTAGAGAATCTAACACTCACCTCACAACCTTTCTATACATTAAAGTTATTCGTTGAGGCTACTTTTCTTTACATCAAGCGCTCTAT ATCATATCTACTCTCTCATGGAGGCTGGTTCTTGCTTGTAACCACTTTGTTGGTCGTATTTGGAGTTTTGCTTGCGACCGTTGATG GACCTCATGGAAAGCATGTTGAAGAGCTATTAGAGTATGTTCGGTACAGCTTATGGTGGATAGCACTTGGAGTTGCATCTTCTATT GGTCTTGGATCTGGTCTACACACTTTTGTTCTCTATTTGGGTCCACACATTGCTTTGTTCACTCTAAAAGCAACTCAATGCGGGCG GGTCGATCTCAAATCTGCACCTTACGATACCATTCAGTTGAAACGGGTTCCGTCGTGGCTAGACAAACCTTGCTCAGAGTTTGGTC CTCCGTTAATGATCTCAGCTGCTGGATCTCGTGTTCCCCTTACAAGCATACTGCCGCAAGTCCAACTAG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_567450 SNARE associated Golgi protein [Arabidopsis thaliana]	869	2e-091
AAL24087 unknown protein [Arabidopsis thaliana]	862	1e-090
XP_002870270 predicted protein [Arabidopsis lyrata subsp. lyrata]	862	1e-090
NP_974552 SNARE associated Golgi protein [Arabidopsis thaliana]	827	1e-086
NP_974551 SNARE associated Golgi protein [Arabidopsis thaliana]	827	1e-086

Swiss-Prot top hits (Blast detail)	Score	e value
Q6NYY9 Transmembrane protein 49	242	5e-020
Q0VCK9 Transmembrane protein 49	233	5e-019
Q5R9K4 Transmembrane protein 49	231	9e-019
Q91ZQ0 Transmembrane protein 49	231	9e-019
Q96GC9 Transmembrane protein 49	230	1e-018

TrEMBL top hits (Blast detail)	Score	e value
Q5XF36 At4g14950	869	1e-091
Q93YX1 Putative uncharacterized protein At4g14950	862	9e-091
Q3EA25 Putative uncharacterized protein At4g14950.3	827	1e-086
Q3EA26 Putative uncharacterized protein At4g14950.2	827	1e-086
O23350 Putative uncharacterized protein AT4g14950 (Fragment)	826	1e-086

Arabidopsis top hits (Blast detail)	Score	e value
AT4G14950.1 unknown protein	869	9e-094
AT4G14950.2 unknown protein	827	7e-089
AT4G14950.3 unknown protein	827	7e-089
AT1G05360.1 unknown protein	660	2e-069

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	1			100%

Unigene Members