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Information for unigene UN61258

FASTA Sequence
Unigene ID: UN61258Length: 708 SSR 
GGAGAGGATCTACGAAACTTCTATTTGGGGGTTTTCTTTTCTTCTAGATCCTAGCTAATTCGTCTAAAGACGTCGCCTTTTGACGA
CGACGACGACGACGACGACCCTTTCTCTCTTTTTCCTCCGCCTTCCTCCCACGCACAACAAATCTCTCACTTTTTTTCCTCAACTA
TGCCTTCCAATACGGCGTCGTCTAGCTCCGCCCCTGCCGGATCTGCAGATTCTTCCTCCTCCCGTACAAAATCCAAACGACCCAAG
TATTCGAAGTTTACACAGCAGGAGCTTCCTGCTTGCAAGCCGATTCTCACGCCTGGTTGGGTGATTCTGACTTTTTTAGTCATTAG
CGTGATCTTCATTCCACTCGGAGTTGTTTCGCTTTTCGCTTCCCAGGATGTTGTTGAGATCGTTGATCGGTATGATAATGATTGCG
TACCGACGCCTGCTAGGGCTAACAAGGTTGCTTTTATTCAAGGAGGTGGAGACAAATCTTGTAACCGGACACTAGTGGTTCCTAAG
AAGATGAAGCAGCCTATCTACGTTTATTACCAGCTTGAGAACTTCTACCAGAATCACCGCACGTATGTGAAAAGCAGAAGTGATGC
GCAGTTGAGAAGTGTGAAAGATGAGAACCAAATCGATGCATGCAAGCCTGAGGATGATGCTAATGGCCGGCCGATTGTGCCGTATG
GTCTGATTGCTTGGAGTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566435 ALA-interacting subunit 1 [Arabidopsis thaliana]7805e-081
NP_564656 ALA-interacting subunit 3 [Arabidopsis thaliana]7699e-080
XP_002882787 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]7662e-079
XP_002894565 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]7617e-079
XP_002265244 PREDICTED: hypothetical protein [Vitis vinifera]6622e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q9LTW0 ALA-interacting subunit 17802e-082
Q9SLK2 ALA-interacting subunit 37694e-081
Q8L8W0 ALA-interacting subunit 56592e-068
Q67YS6 Putative ALA-interacting subunit 24423e-043
Q9SA35 Putative ALA-interacting subunit 43913e-037

TrEMBL top hits (Blast detail)Scoree value
B9RRQ2 Putative uncharacterized protein6442e-065
B9HYB5 Predicted protein6102e-061
B9HI35 Predicted protein5903e-059
Q6BBR1 Putative uncharacterized protein Lj-CDC50 like 15895e-059
C6T8B4 Putative uncharacterized protein5716e-057

Arabidopsis top hits (Blast detail)Scoree value
AT3G12740.1 ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter7802e-083
AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein7694e-082
AT1G79450.1 ALIS5 (ALA-Interacting Subunit 5)6592e-069
AT1G16360.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein5794e-060
AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein4423e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members