Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN61340

FASTA Sequence
Unigene ID: UN61340Length: 722 SSR 
GGTACAAGGGTGTCTGAAGCAGACATGTGCTAGTTAACCACACGACGACGACGAGGAACTCTAAAGTAAACCCTAATTTCAAAGTT
TCGCCCTTAACATTGTTTTCAAAGCGGTTCTGCTGCGATGGAAGACGATACGTGGGCTGTTTCCTCTTCTGGTTCTTCCAGAAGCT
ATCGATCATCGGCAACGACAGCTGCTAAGTATCAGTCTGGTTCTTACCTAGATTCGGGAGACTTTGAAGAAGAAGAAGAAGAAGAA
GAAGATGATGATGATGTTGAAGTGGATTACCCATGTCCGTTTTGCTCTGATGATTATGATTTAGTCGAACTGTGTCACCATATCGA
CGAAGAACATCAGCTTGAAGCTACCTATGGGCTATGCCCGGTTTGTAACAAAATGGTGAAGATGGACATGGTGGATCATATAACCT
CATATCATAGAGATGTCTTGAAGATATCCTTTTTTTTCTCATTTAAAAAACTTTACAGTGTGCAGAAGCAGACATCTTCTTACATG
GACGATCCATACTCATCAGATAAACATCTTCGATCATTTCACGATGACTTTCCACCATATACGCATACTTCTAAACCCGTTGTTGC
GGACCACTTTTTATCTTTCCTCAACAGTCCCCCATTGCCAAAGCAAACCAAGCCTGTGCATGAGGTTGATTCAAATGCAGAAGACA
AGATTTGACTGAGCTGATTCCTCTACAGTAAAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33794 unnamed protein product [Thellungiella halophila]5824e-058
NP_171775 protein DEHYDRATION-INDUCED 19-like protein 2 [Arabidopsis thaliana]4866e-047
NP_192129 protein dehydration-INDUCED 19-5 [Arabidopsis thaliana]3916e-036
NP_849286 protein dehydration-INDUCED 19-5 [Arabidopsis thaliana]3916e-036
XP_002874929 drought-responsive family protein [Arabidopsis lyrata subsp. lyrata]3674e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWK1 Protein DEHYDRATION-INDUCED 19 homolog 25222e-052
O04259 Protein DEHYDRATION-INDUCED 19 homolog 53913e-037
Q8VXU6 Protein DEHYDRATION-INDUCED 19 homolog 42264e-018
Q9FJ17 Protein DEHYDRATION-INDUCED 19 homolog 72264e-018
Q6NM26 Protein DEHYDRATION-INDUCED 19 homolog 62112e-016

TrEMBL top hits (Blast detail)Scoree value
B9I9N5 Predicted protein2921e-024
B9GSE3 Predicted protein2571e-020
B9SAX0 Putative uncharacterized protein2517e-020
B9N4N3 Predicted protein2185e-016
B9I720 Predicted protein2168e-016

Arabidopsis top hits (Blast detail)Scoree value
AT1G02750.1 zinc ion binding5222e-053
AT4G02200.1 drought-responsive family protein3913e-038
AT4G02200.2 drought-responsive family protein3913e-038
AT3G06760.1 INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding (TAIR:AT5G49230.1); Has 133 Blast hits to 133 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2264e-019
AT5G49230.1 HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding2264e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members