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Information for unigene UN61394

FASTA Sequence
Unigene ID: UN61394Length: 714 SSR 
TTTTTAATCTGTCTTCCAGACTTTCATCTTCGATCCCTCTCTCTCTCTCTCTCTCCGTTACCTTTTGCTTCTCAGATCTTGGGTTG
ACCGTACCGATCGTTGACCTTCCTGAATCGTAATCTGGGCTCGTCTTAAAAAAAAATCAAAACTTTCTCCTTCGGGGAGCTCGAGA
CTAACAATTTATATAAGAAAGGTCGAGTCTTTGGTTCTGGGTTATGATGAACTAGTATGGAACTGATCGTTGTCACACGAAAACAA
GAAGAAGAAGAAGAAGATCAATAAGAGAGAGATGACGCTTTACATTCGTCGCGAATCTTCCAAGCTGTGGAAGAGATTTTGCTCGG
AGATAACGACGGAGATCGGTCTCCTCGCTGAGAACTGGAAGTACCTTGTCGCTGGTATTATCTGTCAGTACATTCATGGTTTGGCT
GCTAAAGGAGTTCATTATATTCATCGCCCTGGACCGACTCTCCAGGATCTTGGCTTCTTTCTCCTTCCGGAGCTTGGTCAAGAGAG
AAGCTACATAAGTGAAACCGTGTTCACTACTGTATTTGTTTCCTTTTTCCTGTGGACTTTCCATCCATTCATCCTGAAAAGCAAAA
AGATATACACCGTCTTGATATGGTGCAGAGTTCTAGCGTTCTTAGTTGCCTGTCAGTTTCTCCGTGTTATAACATTCTATTCAACT
CAGCTTCCTGGCCCAAACTATCACTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565875 inositol phosphorylceramide synthase 2 [Arabidopsis thaliana]7393e-076
XP_002879716 hypothetical protein ARALYDRAFT_482800 [Arabidopsis lyrata subsp. lyrata]7393e-076
XP_002876236 hypothetical protein ARALYDRAFT_906800 [Arabidopsis lyrata subsp. lyrata]7142e-073
NP_190970 inositol phosphorylceramide synthase 1 [Arabidopsis thaliana]7071e-072
XP_002527893 conserved hypothetical protein [Ricinus communis]6622e-067

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SH93 At2g37940/T8P21.157392e-076
Q9M325 At3g54020/F5K20_3207071e-072
B9SPH4 Putative uncharacterized protein6622e-067
B9HC73 Predicted protein6487e-066
B9IG09 Predicted protein6433e-065

Arabidopsis top hits (Blast detail)Scoree value
AT2G37940.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 316 Blast hits to 316 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).7391e-078
AT3G54020.1 phosphatidic acid phosphatase-related / PAP2-related7076e-075
AT2G29525.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 352 Blast hits to 352 proteins in 78 species: Archae - 0; Bacteria - 4; Metazoa - 245; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).5373e-055
AT2G29525.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 352 Blast hits to 352 proteins in 78 species: Archae - 0; Bacteria - 4; Metazoa - 245; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).5373e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members