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Information for unigene UN61609
| FASTA Sequence |
| Unigene ID: UN61609 | Length: 668 |
SSR | | GGAGATAACCCTAATTTCACCCGACACAGGACACGCCGTTTCGCTTCTTCTCACCACCAACTGATCTCTTCAGATGTCGCGTGTGT
ACGTTGGTAATCCGGACCCGCGAGTTACGGAGCGTGAACTCGAGGATGAGTTTCGTGTCTATGGAGTCATCAAGAGTGTTTGGGTT
GCGAGACGACCACCTGGTTACGCTTTTCTTGATTTCGAAGACTCAAGGGATGCCCGCGACGCCATCCGTGACTTAGATGGCAAGAA
TGGATGGAGAGTAGAGCAGTCTCATAACCGTGGTGGTGGTGGTGGAGGAGGCCGTGGTGGCGGTGGAGGCCGTGATGGAGGTCGAG
GCCGTGGTGGTTCTGATTTGAAGTGCTATGAGTGTGGCGAGTCTGGTCACTTTGCGCGTGAATGCCGCTCTCGTGGTGGTGGTGGC
TCTAGGAGGGGTCGCAGTCCTTCTCCTCGTGGTCGCAGCCGTAGTCGCAGTCCTCCAAGATACAGAAAGAGCCCTACCTATGGAGG
GCGCAGGAGTTACAGCCCTCGTGCAAGATCTCCTCCTCCTCCTAGACGTCGCAGTCCTTCTCCTCGTGGTCGCAACTACAGTAGGT
CACCTCCACCTTACAGAGCACGTGACGAGGTCCCCTATACTAATGGAAATGGTCTGAAAGATGTGC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002878770 hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp. lyrata] | 962 | 3e-102 |
| NP_180035 RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] | 951 | 6e-101 |
| NP_194886 protein serine/arginine-rich 22 [Arabidopsis thaliana] | 851 | 2e-089 |
| CAA05352 RSZp22 protein [Arabidopsis thaliana] | 844 | 2e-088 |
| XP_002869320 hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp. lyrata] | 736 | 5e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q16629 Splicing factor, arginine/serine-rich 7 | 298 | 2e-026 |
| Q18409 Probable splicing factor, arginine/serine-rich 6 | 289 | 2e-025 |
| Q8BL97 Splicing factor, arginine/serine-rich 7 | 284 | 6e-025 |
| Q3T106 Splicing factor, arginine/serine-rich 7 | 281 | 1e-024 |
| Q3SZR8 Splicing factor, arginine/serine-rich 3 | 206 | 7e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9SJA6 At2g24590 | 951 | 4e-101 |
| O81126 9G8-like SR protein | 851 | 2e-089 |
| O23646 RSZp22 protein | 844 | 1e-088 |
| Q2QKC3 Pre-mRNA processing factor | 653 | 2e-066 |
| B9F110 Putative uncharacterized protein | 600 | 2e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G24590.1 splicing factor, putative | 951 | 3e-103 |
| AT4G31580.1 SRZ-22; protein binding | 851 | 1e-091 |
| AT4G31580.2 SRZ-22; protein binding | 851 | 1e-091 |
| AT1G23860.1 RSZP21 (RS-CONTAINING ZINC FINGER PROTEIN 21); protein binding | 514 | 1e-052 |
| AT1G23860.2 RSZP21 (RS-CONTAINING ZINC FINGER PROTEIN 21); protein binding | 514 | 1e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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