 |
Information for unigene UN61719
| FASTA Sequence |
| Unigene ID: UN61719 | Length: 772 |
SSR | | CCTTATGAACTTTTATAACAGAAAATGTACCAATCATAAGAGGTTTCAATCACACACACACAAGTTGCAAAAGAAGAAAATTTCTC
ACAAAACACCCATTAAAAAGGACAAAATGACTTCGAATCAGGTTTACTGTAAAAGAAGAAAAACACAAGTAGGAAAATTGAATTGC
ATCAAATGATGTCTGCTTGTCGCACCAGGTTATTTTTTCTTTGCAGGCTTGCATGCGTCTACAACACCTGATGAAGCTGAGATACA
GAAGCTGTGCGGATGACATGACGAAACCGATCTTCAGCTCCATCCTCCCATTCAACTCTATCTAACCATCTCTCATCCACTTCTAT
GTCAAGATCATCAATTTTCTCTACGCTTGTGGAGTTGAATGGAAGCTTATGAAGACTTGGACAGTTTTTTATACCGACTTTCCTTA
GCCTTGGAAAAGAGAGTGAACTCCAAAAGATGCTCTTTAAGCTAGGCAAATTCTCAAGATGAAGGACTTGTAGCTTAAGAAAAGGC
TCCACGTTGACACCCGCAGCTTTCTCTTCGCTTATAACTTCTTCCATCTTAGGTGAGGTTTCTACTCTTAGAGACTCAAGATTTGC
AGCATATATCAGCCATGTCAAATCCTTTATGATATCACAGTTTACCACTTCAACATTTCGAAGACTACTCAACGCACCCAAGGTGG
CTTCAAATGATTGTCCTGATACTCCTGAAACTTTGATTCCTTCCAGAGATAGACCCTATGTACACCCTGACAATCTGCTTCGTA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACP30558 disease resistance protein [Brassica rapa subsp. pekinensis] | 299 | 3e-025 |
| XP_002892681 F5O11.3 [Arabidopsis lyrata subsp. lyrata] | 293 | 2e-024 |
| NP_172693 CC-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 285 | 1e-023 |
| AAF79659 F5O11.3 [Arabidopsis thaliana] | 285 | 1e-023 |
| NP_001154329 CC-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 285 | 1e-023 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L3R3 Disease resistance protein RFL1 | 304 | 4e-027 |
| O23317 Probable disease resistance protein At4g14610 | 291 | 1e-025 |
| P60839 Probable disease resistance protein At1g12290 | 285 | 6e-025 |
| Q940K0 Probable disease resistance protein At1g61180 | 282 | 1e-024 |
| P60838 Probable disease resistance protein At1g12280 | 277 | 5e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D1GEB6 Disease resistance protein | 299 | 2e-025 |
| Q2V4G0 Uncharacterized protein At1g61180.2 | 286 | 7e-024 |
| B9I6Q3 Cc-nbs-lrr resistance protein | 262 | 4e-021 |
| Q19D92 Disease resistance protein (Fragment) | 215 | 1e-015 |
| Q19DB2 Disease resistance protein (Fragment) | 215 | 1e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12210.1 RFL1 (RPS5-like 1); ATP binding / protein binding | 304 | 4e-028 |
| AT1G61180.2 disease resistance protein (CC-NBS-LRR class), putative | 286 | 5e-026 |
| AT1G12290.1 disease resistance protein (CC-NBS-LRR class), putative | 285 | 6e-026 |
| AT1G12290.2 disease resistance protein (CC-NBS-LRR class), putative | 285 | 6e-026 |
| AT1G61180.1 disease resistance protein (CC-NBS-LRR class), putative | 282 | 1e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
